/ChlamBase.org

Primary LanguageJupyter NotebookMIT LicenseMIT

ChlamBase.org

Genomic data portal to Wikidata.org built specifically for the chlamydial research community

ChlamBase.org, a fork of WikiGenomes.org, is an open source and user-curated database of functional annotations for 3 model Chlamydia species: C. trachomatis 434/BU ( LGV L2 ), C. trachomatis D/UW-3/CX, and C. muridarum Nigg. A primary goal of this portal is to provide a powerful user-oriented experience tailored to the research interests of the Chlamydia research community, and to the unique biology of Chlamydia.

A central feature of ChlamBase is to allow users to view, add, and edit: *evidence-based gene annotations *engineered mutant strains *orthologous gene comparisons *developmental gene expression *host interaction targets

Instructions to create a model organism database for the microbes of your choice, go to the wikigenomes_base repository and follow the build instructions.