pvnlubenia
A mathematician passionate about biomathematics, musical theatre, and Harry Potter.
Manila, Philippines
Pinned Repositories
ACORNS
MATLAB code to determine the species with absolute concentration robustness of a chemical reaction network of Shinar-Feinberg type
ACORNS-Octave-
Octave code for absolute concentration robustness of networks of Shinar-Feinberg type [acr.m is placed on this page as a preview of the code; the same file is included in ACORNS-Octave-.zip]
aggregation
BARONESS
MATLAB code to determine the basis for the orthogonal complement of the stoichiometric subspace of a chemical reaction network
CHECKMATE
MATLAB code to generate the ordinary differential equations of a kinetic representation of a mass action system
COMPILES
MATLAB code to compute the analytic positive steady states of a mass action system
CRANBERRY
MATLAB code to generate the network numbers of a chemical reaction network
DECENT
MATLAB codes to generate the finest decompositions with network numbers of a chemical reaction network
DESIRE
MATLAB code to generate directed spanning trees away from or towards a vertex
MODERN
MATLAB code to generate a kinetic representation of the set of ordinary differential equations of a mass action system
pvnlubenia's Repositories
pvnlubenia/ACORNS
MATLAB code to determine the species with absolute concentration robustness of a chemical reaction network of Shinar-Feinberg type
pvnlubenia/ACORNS-Octave-
Octave code for absolute concentration robustness of networks of Shinar-Feinberg type [acr.m is placed on this page as a preview of the code; the same file is included in ACORNS-Octave-.zip]
pvnlubenia/aggregation
pvnlubenia/BARONESS
MATLAB code to determine the basis for the orthogonal complement of the stoichiometric subspace of a chemical reaction network
pvnlubenia/CHECKMATE
MATLAB code to generate the ordinary differential equations of a kinetic representation of a mass action system
pvnlubenia/COMPILES
MATLAB code to compute the analytic positive steady states of a mass action system
pvnlubenia/CRANBERRY
MATLAB code to generate the network numbers of a chemical reaction network
pvnlubenia/DECENT
MATLAB codes to generate the finest decompositions with network numbers of a chemical reaction network
pvnlubenia/DESIRE
MATLAB code to generate directed spanning trees away from or towards a vertex
pvnlubenia/MODERN
MATLAB code to generate a kinetic representation of the set of ordinary differential equations of a mass action system
pvnlubenia/CLAMS
MATLAB code to generate the conservation laws of a mass action system
pvnlubenia/CRANBERRY-Octave-
Octave code for network numbers of chemical reaction networks [network_numbers.m is placed on this page as a preview of the code; the same file is included in CRANBERRY-Octave-.zip]
pvnlubenia/INCIDENTS
MATLAB code to generate the finest incidence independent decomposition of a chemical reaction network
pvnlubenia/INDECS
MATLAB code to generate the finest independent decomposition of a chemical reaction network
pvnlubenia/INDECS-Octave-
Octave code for independent decomposition of chemical reaction networks [indep_decomp.m is placed on this page as a preview of the code; the same file is included in INDECS-Octave-.zip]
pvnlubenia/infectious-diseases
pvnlubenia/MODERN-Octave-
Octave code for converting a mass action ordinary differential equation system to a chemical reaction network [ode_to_crn.m is placed on this page as a preview of the code; the same file is included in MODERN-Octave-.zip]
pvnlubenia/PASSIVE
MATLAB code to determine if a power law system is injective
pvnlubenia/segregation