GraphDataToNetworkxGraphList

Reads graph data from:

and outputs them as a list of python networkx graphs, see the details below.

Functions:

graph_data_to_graph_list(path, db) Takes database path {path} and database-name {db} and outputs the graph data in form of a triple: (graph_list, graph_labels, graph_attributes)

-graph_list: #python list of networkx graphs with graph information given by the database

-graph_labels: #python list of integers as the labels of the graphs according to the database

-graph_attributes: #python list with additional attributes of the graphs according to the database or empty list if there are none
node_label_vector(graph, node_id) #outputs vector of node_label of node with {node_id} in graph {graph}
node_attribute_vector(graph, node_id) #outputs vector of node_attributes of node with {node_id} in graph {graph}
nodes_label_matrix(graph) #same as above but outputs all labels of nodes of graph {graph}
nodes_attribute_matrix(graph) #same as above but outputs all attributes of nodes of graph {graph}
edge_label(graph, node_i, node_j) #outputs vector of edge_labels of edge (node_i, node_j) in graph {graph}
edge_attribute_matrix(graph, node_i, node_j) #outputs vector of edge_attributes of edge (node_i, node_j) in graph {graph}

======= Python example:

path = "path_to_dbs/"
db = "MUTAG"
graph_data = graph_data_to_graph_list(path, db)
graph_list, graph_labels, graph_attributes = graph_data

pwelke/GraphDataToNetworkxGraphList