Is it possible to load a certain slice of a nii.gz file using the itksnap command line?
Opened this issue · 2 comments
xh542428798 commented
I use /Applications/ITK-SNAP.app/Contents/MacOS/ITK-SNAP [options] [main_image] to load image.
- Is it possible to load a certain slice of a nii.gz file using the itksnap command line?
- Also, if I have a mask, is there a simple way to convert label2 to label1?
xh542428798 commented
Sir, by the way, are there shortcuts for these buttons? I did not find the shortcut for these buttons.
pyushkevich commented
The closest to what you are looking for is the key | (vertical bar) that
toggles between layouts.
There is no option from command line to load a specific slice of a NIFTI
file
To replace a label with another label, you can use the 3D scalpel tool. See
towards the end of this tutorial:
http://www.itksnap.org/pmwiki/pmwiki.php?n=Documentation.TutorialSectionRegionSegmentation
…On Wed, Jan 17, 2024 at 9:35 PM Hui Xie ***@***.***> wrote:
Sir, by the way, are there shortcuts for these buttons? I did not find the
shortcut for these buttons.
image.png (view on web)
<https://github.com/pyushkevich/itksnap/assets/49368033/12554d97-cb44-4655-aa4f-5206147408a7>
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