An ITK-based implementation of morphological contour interpolation based off the paper:
Albu AB1, Beugeling T, Laurendeau D. "A morphology-based approach for interslice interpolation of anatomical slices from volumetric images." IEEE Trans Biomed Eng. 2008 Aug;55(8):2022-38. doi: 10.1109/TBME.2008.921158.
Documentation can be found in the Insight Journal article:
Zukić D., Vicory J., McCormick M., Wisse L., Gerig G., Yushkevich P., Aylward S. "ND Morphological Contour Interpolation", The Insight Journal, January-December, 2016. http://insight-journal.org/browse/publication/977 http://hdl.handle.net/10380/3563
To install the Python packages:
python -m pip install --upgrade pip python -m pip install itk-morphologicalcontourinterpolation
Since ITK 4.11.0, this module is available in the ITK source tree as a Remote module. To enable it, set:
Module_MorphologicalContourInterpolation:BOOL=ON
in ITK's CMake build configuration.
This work is supported by NIH grant R01 EB014346, “Continued development and maintenance of the ITK-SNAP 3D image segmentation software."