Pinned Repositories
core-utils-lib
Library containing core classes and utilities that are independent of a portal.
data-manager-app
A web-based life science omics and imaging data management solution
data-model-lib
Libraries providing functionality for the QBiC/openBIS data model
etl-scripts
ETL scripts written in Jython 2.7 for openBIS dropboxes.
nextflow-logger-service
Consumes Nextflow weblog payloads via Http REST and stores them in a database.
offer-manager-2-portlet
The offer manager assists in creating offers with version control and person master data handling.
projectwizard-portlet
QBiC Project Wizard enables users to create hierarchical experiments including different study conditions using factorial design.
sample-tracking-service
Service that implements a sample tracking interface.
vaccine-designer-portlet
A portlet for the interactive design of individualized vaccines
variantstore-service
The Variantstore is a Java/Groovy-based service application implemented using the Micronaut framework and enables storage and access to information on genomic variants and metadata from a connected database via a RESTful API.
QBiC's Repositories
qbicsoftware/data-manager-app
A web-based life science omics and imaging data management solution
qbicsoftware/etl-scripts
ETL scripts written in Jython 2.7 for openBIS dropboxes.
qbicsoftware/data-model-lib
Libraries providing functionality for the QBiC/openBIS data model
qbicsoftware/variantstore-service
The Variantstore is a Java/Groovy-based service application implemented using the Micronaut framework and enables storage and access to information on genomic variants and metadata from a connected database via a RESTful API.
qbicsoftware/offer-manager-2-portlet
The offer manager assists in creating offers with version control and person master data handling.
qbicsoftware/postman-cli
A client software for dataset request and download from openBIS
qbicsoftware/openbis-client-lib
qbicsoftware/QMSFC
Data and code for the `Multiomics surface receptor profiling of the NCI-60 tumor cell panel uncovers novel theranostics for cancer immunotherapy` paper.
qbicsoftware/user-db-portlet
User DB Tools Portlet enables users to add people and affiliations to the SQL user database.
qbicsoftware/core-utils-lib
Library containing core classes and utilities that are independent of a portal.
qbicsoftware/sample-tracking-service
Service that implements a sample tracking interface.
qbicsoftware/CRISPR-Cas9_regorafenib_2024
qbicsoftware/data-download-server
qbicsoftware/data-manager-app-design-system
qbicsoftware/data-processing
QBiC's post-upload server-side logic to prepare datasets for registration
qbicsoftware/dm-onthology-owl-2-json
Resolves an OWL resource and writes into JSON for further services
qbicsoftware/dm-onthology-terms
Loading onthology terms from OWL notations into ORM databases
qbicsoftware/experimental-design-lib
Parsers, writers for experimental design formats etc.
qbicsoftware/ipspine-input-portlet
Portlet to input experiment and measurement information for the open-access knowledge platform
qbicsoftware/java-coding-problems
Training on java coding problems
qbicsoftware/java-openbis-dropboxes
In development experimental ETL procedures written in Java for data registration in openBIS.
qbicsoftware/knowledge-sharing-platform-documentation
Documentation on the setup and use of the open access knowledge sharing platform
qbicsoftware/ncct-style
qbicsoftware/ome-xml-editor
qbicsoftware/openbis20-java-dropboxes
ETL procedures written in Java for data registration in openBIS version 20
qbicsoftware/openbis20-scripts
qbicsoftware/research-data-management
Documentation about the life science research data management at QBiC
qbicsoftware/sample-status-reporter
This application collects sample status information and reports it to QBiC
qbicsoftware/sample-tracking-status-overview
Gives a visual overview of sample statuses
qbicsoftware/scark-cli