qdu-bioinfo

Pinned Repositories

• parallel-meta-suite

  Language:C++209

• Meta-Spec

  Language:Python61

• hierarchical-meta-storms

  A C++ software contains two core components: i) a dissimilarity algorithm that comprehensively calculates the distances among microbiome functional profiles by considering their multi-level metabolic pathway hierarchy among functional gene families, and ii) a PCoA implementation optimized by multi-thread parallel computing to rapidly parse out the beta-diversity pattern for thousands of samples.

  Language:C++21

• mip

  Language:C++20

• WTHMDA

  Source code for the paper "Discovering microbe-disease associations with weighted graph convolution networks and taxonomy common tree".

  Language:Python20

• PM_CNN

  Language:JavaScript11

• bioconda-recipes

  Conda recipes for the bioconda channel.

  Language:Shell00

• fc-virus

  Language:C++00

• FC-Virus-Supplementary

  00

• flex-meta-storms

  Flex Meta-Storms (FMS) can mine potential relationships generated by a small subset of microbes in community samples.

  Language:C++00

qdu-bioinfo's Repositories