Pinned Repositories
ALTSS
Using single-nuclei ATAC-seq data to study alternative transcription start site usage.
FromScratch
A collection of notebooks and code where I discuss the theory then implement data science algorithms. from scratch.
gsdensity
GSDensity_manuscript_code
human-retina-multiomics
Code for analyzing human retina single-cell data
LSGI
Local Spatial Gradient Inference
LSGI_manuscript_code
mcaext
mcaext.temp
identification of deviated pathway and the most relevant cells (temporary)
SRAVG
qingnanl's Repositories
qingnanl/gsdensity
qingnanl/GSDensity_manuscript_code
qingnanl/human-retina-multiomics
Code for analyzing human retina single-cell data
qingnanl/LSGI
Local Spatial Gradient Inference
qingnanl/SRAVG
qingnanl/ALTSS
Using single-nuclei ATAC-seq data to study alternative transcription start site usage.
qingnanl/FromScratch
A collection of notebooks and code where I discuss the theory then implement data science algorithms. from scratch.
qingnanl/LSGI_manuscript_code
qingnanl/mcaext
qingnanl/mcaext.temp
identification of deviated pathway and the most relevant cells (temporary)
qingnanl/NGS
Next-Gen Sequencing tools from the Horvath Lab
qingnanl/oneliners
Useful bash one-liners for bioinformatics.
qingnanl/qingnanliang.github.io
qingnanl/scRNA-seq_code
This repository is to store code used for scRNA-seq, including preprocessing, clustering, downstream analysis and plotting.
qingnanl/single-cell-tools
some single-cell tools that may be useful
qingnanl/singleCellHaystack
Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).