quark-strange

Digraph_enumeration

enumerating all the strongly connected digraphs for given number of vertices

enformer-pytorch

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

geom

GEOM: Energy-annotated molecular conformations

GNN_LDP

Implement graph neural network for dynamical large deviation calculations

LyapunovLearning

machine_learning_LDP

Notebooks for "Learning Nonequilibrium Control Forces to Characterize Dynamical Phase Transitions"

pykan

Kolmogorov Arnold Networks

shelfrich

Monte Carlo simulations of bacterial microcompartment self-assembly

stochastic_processes

Numerical realisations of several stochastic process

torchmd-net

Training neural network potentials

quark-strange/machine_learning_LDP

Notebooks for "Learning Nonequilibrium Control Forces to Characterize Dynamical Phase Transitions"

quark-strange/Digraph_enumeration

enumerating all the strongly connected digraphs for given number of vertices

quark-strange/GNN_LDP

Implement graph neural network for dynamical large deviation calculations

quark-strange/enformer-pytorch

Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

quark-strange/geom

GEOM: Energy-annotated molecular conformations

quark-strange/LyapunovLearning

quark-strange/pykan

Kolmogorov Arnold Networks

quark-strange/shelfrich

Monte Carlo simulations of bacterial microcompartment self-assembly

quark-strange/stochastic_processes

Numerical realisations of several stochastic process

quark-strange/torchmd-net

Training neural network potentials