qyber-black/Code-QDicom-Utilities

A set of utilities to deal with dicom files and data repositories.

QDicom Utilities

SPDX-FileCopyrightText: Copyright (C) 2020-2023 Frank C Langbein frank@langbein.org, Cardiff University
SPDX-License-Identifier: AGPL-3.0-or-later

A set of utilities to deal with dicom files and data repositories, specifically aimed at the qyber archives, but some may be more generally useful or adaptable.

• read_dicom_siemens.py
  • Display/write DICOM info/image/spectroscopy, specifically for Siemens IMA files.
  • Read dicom functions for import in other tools.
  • This can specifically deal with Siemens CSA headers.
• check-dataset-structure.py
  • Check and possibly fix file system structure of a dicom dataset.
• create_dataset.py
  • Creates dataset from dicom repository
• conv_picai.py
  • Creates dataset from PI-CAI repositories

See the --help messages and the comments in the files for more information.

See requirements.txt for dependencies. It's installable via pip3 install -r requirements.txt.

Locations

The code is developed and maintained on qyber\black at https://qyber.black/pca/code-qdicom-utilities

This code is mirrored at

• https://github.com/qyber-black/Code-QDicom-Utilities

The mirrors are only for convenience, accessibility and backup.

People

• Frank C Langbein, School of Computer Science and Informatics, Cardiff University; langbein.org