Pinned Repositories
CTMCdive
R package to fit continuous-time Markov chain to dive data
fmin
Minimize a multivariate function
IrnBrukdown
Bookdown template for a online+pdf academic book
madness_hmms
Comparing fitting HMMs with R, RcppArmadillo, and TMB
moveds
Incorporating animal movement into distance sampling
msgam
Markov-switching generalized additive models in TMB
occuR
Occupancy modelling with generalized additive models in Template Model Builder.
openpopscr
Fits open population spatial capture-recapture by maximum likelihood
randomeffect_hmms
Simple example of including random effect on step-turn hidden Markov models with TMB.
SimDs
Simulate line transect distance sampling with moving animals.
r-glennie's Repositories
r-glennie/occuR
Occupancy modelling with generalized additive models in Template Model Builder.
r-glennie/madness_hmms
Comparing fitting HMMs with R, RcppArmadillo, and TMB
r-glennie/openpopscr
Fits open population spatial capture-recapture by maximum likelihood
r-glennie/CTMCdive
R package to fit continuous-time Markov chain to dive data
r-glennie/msgam
Markov-switching generalized additive models in TMB
r-glennie/randomeffect_hmms
Simple example of including random effect on step-turn hidden Markov models with TMB.
r-glennie/fmin
Minimize a multivariate function
r-glennie/IrnBrukdown
Bookdown template for a online+pdf academic book
r-glennie/moveds
Incorporating animal movement into distance sampling
r-glennie/SimDs
Simulate line transect distance sampling with moving animals.
r-glennie/msmbstyle
Tufte inspired bookdown template
r-glennie/mt4113-2019-base-prac
Base repo for MT4113-2019 practical
r-glennie/pathIntegrateR
Compute sparse matrix exponential's action on a vector. Effectively integrating over all of the paths that could be travelled over a discrete state space in continuous time.
r-glennie/r-glennie0
r-glennie/rsparse
Fast and accurate machine learning on sparse matrices - matrix factorizations, regression, classification, top-N recommendations.
r-glennie/smoothSDE
Fit stochastic differential equation models with time-varying parameters