This repository contains various scripts for bioinformatics analysis pipeline.
- ncbi_nucleotide_db_seq_data_downloader.py: used to download sequence fasta files from NCBI-Nucleotide.
- chromosomes_counter.py: used to count the number of chromosomes in a sequencing file.
- genes_variants_counter.ipynb: used to identify genes, transcript variants, and other stuff.
- files_merger.py: used to merge multiple fasta files into one.
- get_sra_data.sh: used to download sequence SRA and fastq files from NCBI-SRA database.