rafelafrance
If you stare into the data long enough, the data stares back.
Florida Museum of Natural HistoryGainesville Florida
Pinned Repositories
digi_leap_old
Extract information from images of herbarium specimens
FloraTraiter
Parsers (rule-based) for information extraction of traits from plant treatments
herbarium_phenology
Extract phenological data from digitized herbarium specimens
label_finder
Use a neural network to find labels on images of herbarium sheets
LabelTraiter
Extract traits from OCRed text of herbarium labels
nitfix
Phylogenomic discovery and engineering of nitrogen fixation into the bioenergy woody crop poplar
ocr_ensemble
OCR herbarium labels with an ensemble of image processing and OCR engines
pdf_parsers
Utilities for parsing PDFs for information extraction
phylogenomic_dataset_construction
traiter
Extract information from natural history annotations
rafelafrance's Repositories
rafelafrance/FloraTraiter
Parsers (rule-based) for information extraction of traits from plant treatments
rafelafrance/traiter
Extract information from natural history annotations
rafelafrance/digi_leap_old
Extract information from images of herbarium specimens
rafelafrance/ocr_ensemble
OCR herbarium labels with an ensemble of image processing and OCR engines
rafelafrance/label_finder
Use a neural network to find labels on images of herbarium sheets
rafelafrance/herbarium_phenology
Extract phenological data from digitized herbarium specimens
rafelafrance/LabelTraiter
Extract traits from OCRed text of herbarium labels
rafelafrance/pdf_parsers
Utilities for parsing PDFs for information extraction
rafelafrance/digi-leap
Extract information from labels on herbarium sheets
rafelafrance/phenobase
Classifiers for the Phenobase project
rafelafrance/reconcile_traits
Reconcile traits from LabelTraiter and ChatGPT4
rafelafrance/common_utils
Utilities used in several repositories
rafelafrance/segment_seeds
Instance segmentation of seeds on images
rafelafrance/spell-well
A simple delete only spell checker
rafelafrance/digi_leap_server
rafelafrance/dot_configs
Transfer my configs
rafelafrance/ectoparasites
Utilites and database supporting ectoparasite research
rafelafrance/label_reconciliations
Code for reconciling multiple transcriptions for a label
rafelafrance/lidar
A Python package for delineating nested surface depressions from digital elevation data.
rafelafrance/line-align
Multiple sequence alignment on lines of text
rafelafrance/mosquito
Support for research on mosquitos
rafelafrance/PowerRANGES
Rule-based trait parsers supporting the RANGES project
rafelafrance/qmk_firmware
Open-source keyboard firmware for Atmel AVR and Arm USB families
rafelafrance/reconciler
rafelafrance/traiter_efloras
Extract information in plant "treatments" from eFloras
rafelafrance/traiter_llm
Get traits from a large language model
rafelafrance/traiter_mimosa
Extract traits about mimosas from authoritative literature
rafelafrance/traiter_odonata
Extract trait information from field guides of dragonflies
rafelafrance/traiter_plants
Holds patterns common to all Traiter projects for plants
rafelafrance/traiter_vertnet