Pinned Repositories
amplicon_analysis_with_dada2
Analysis of MiSeq amplicons using dada2
amplicon_processing
Scripts and workflows for MiSeq amplicon processing
ANCOM
R scripts for Analysis of Composition of Microbiomes (ANCOM).
ARGES
BBMO.krabberod.etal
Data from the Blanes Bay Microbial Observatory (BBMO) (http://bbmo.icm.csic.es)
BM_V4_DB
Database including the most abundant OTUs (at 97% clustering) from pyroreads from the BioMarKs survey
community.ecology.with.r
mitags_extraction_protocol
mitags extraction protocol
PIDA
ramalok's Repositories
ramalok/PIDA
ramalok/amplicon_processing
Scripts and workflows for MiSeq amplicon processing
ramalok/community.ecology.with.r
ramalok/mitags_extraction_protocol
mitags extraction protocol
ramalok/BM_V4_DB
Database including the most abundant OTUs (at 97% clustering) from pyroreads from the BioMarKs survey
ramalok/amplicon_analysis_with_dada2
Analysis of MiSeq amplicons using dada2
ramalok/ANCOM
R scripts for Analysis of Composition of Microbiomes (ANCOM).
ramalok/ARGES
ramalok/BBMO.krabberod.etal
Data from the Blanes Bay Microbial Observatory (BBMO) (http://bbmo.icm.csic.es)
ramalok/bbmo.webpage
Material para la web de BBMO
ramalok/BIO9905MERG1_V21
BIO9905MERG1 – Bioinformatics for Environmental Sequencing (DNA metabarcoding)
ramalok/dada2.tutorial
ramalok/DESMAN
De novo Extraction of Strains from MetAgeNomes
ramalok/EnDED
EnDED is a program that aims to detect environmentally-driven ("indirect") edges in an association network.
ramalok/EukRep
ramalok/filtering.blast.results
Python script to filter blast results
ramalok/GlobalNetworkMalaspinaHotmix
Data and code to "Disentangling marine microbial networks across space"
ramalok/intro.to.r
ramalok/malaspina.surface.metabacoding
ramalok/MAS_V4_DB
Sanger environmental marine sequences of the V4-V5 regions
ramalok/PhotoRefT
PhotoRefT: a 16S rDNA reference tree representing the main groups of picophototrophic eukaryotes and prokaryotes
ramalok/PopCOGenT
Microbial Populations as Clusters Of Gene Transfer
ramalok/pr2_database
Protist Ribosomal Reference database (PR2) - SSU rRNA gene database
ramalok/Recurrence-Index