raminsalmas
I work in bioinformatics, where I apply mathematical and computational methods to explore the intricacies of biology.
King's College London London
Pinned Repositories
auton-survival
Auton Survival - an open source package for Regression, Counterfactual Estimation, Evaluation and Phenotyping with Censored Time-to-Events
DeepBack
DeepBack is a Python-based deep learning algorithm that predicts corrected mass shifts in hydrogen-deuterium exchange mass spectrometry (HDX-MS) profiles.
HDX-constraint-generator
This script is an HDX modeller's sub-tool on HDXsite designed to generate constraint files that could be used in modelling if constraint mode is enabled.
HDX_Folding
This programme utilises machine learning (ML) techniques to predict the secondary structures of amino acids in proteins.
STEPS_Example
Example and tutorial scripts for STEPS simulator
UKB_RAP
Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.
GATE
raminsalmas's Repositories
raminsalmas/auton-survival
Auton Survival - an open source package for Regression, Counterfactual Estimation, Evaluation and Phenotyping with Censored Time-to-Events
raminsalmas/DeepBack
DeepBack is a Python-based deep learning algorithm that predicts corrected mass shifts in hydrogen-deuterium exchange mass spectrometry (HDX-MS) profiles.
raminsalmas/HDX-constraint-generator
This script is an HDX modeller's sub-tool on HDXsite designed to generate constraint files that could be used in modelling if constraint mode is enabled.
raminsalmas/HDX_Folding
This programme utilises machine learning (ML) techniques to predict the secondary structures of amino acids in proteins.
raminsalmas/STEPS_Example
Example and tutorial scripts for STEPS simulator
raminsalmas/UKB_RAP
Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.