ramiromagno/gwasrapidd

Issues

• [Error code 500] get_associations

  #50 opened 2 months ago by jyjo43043ver1
  1

• to get a vairants list from GWAS catalog

  #48 opened 2 months ago by GGboy-Zzz
  4

• [Error] response code was 500

  #49 opened 2 months ago by jyjo43043ver1
  3

• parsing issue while using get_variants()

  #28 opened 3 years ago by peranti
  9

• The associations number obtained by "gwasrapidd" differs extremly from obtained in GWAS Catalog

  #43 opened a year ago by shenlan17
  4

• How download TSV file like on the web GWAS Catalog？or any function can do like that？

  #47 opened 6 months ago by sher-l
  5

• FR: Add export functionality for gwasrapidd objects: `write_xlsx()`

  #45 opened a year ago by ramiromagno
  0

• revisit FAQ 5

  #33 opened 2 years ago by ramiromagno
  1

• `get_studies()` not returning a scores object with efo id `"MONDO_0004648"`

  #46 opened a year ago by ramiromagno
  0

• Error in get_studies

  #13 opened 4 years ago by alexb-84
  5

• About failing download the studies of "get_studies()“

  #38 opened 2 years ago by huyou0916
  6

• How do I export `my_associations` to a table file, separated by tabs

  #44 opened a year ago by Zheng19w
  8

• Why are some gene names present in `genomic_contexts` but not in `ensembl_ids`?

  #42 opened a year ago by mzzclb
  7

• Problem with obtaining the RAF for individual variants contained within associations with a haplotype

  #41 opened 2 years ago by milcs40
  0

• List of Variants to GWAS associations

  #40 opened 2 years ago by lizlitkowski
  3

• Error when running get_associations()

  #39 opened 2 years ago by mightyphil2000
  4

• Response code was 500.

  #36 opened 2 years ago by james-cranley
  3

• Error: parse error: premature EOF in study responses

  #35 opened 2 years ago by ramiromagno
  0

• consider transitioning to the (not so) new pkgdown website template

  #34 opened 2 years ago by ramiromagno
  2

• institutional logo not rendered in footer

  #32 opened 2 years ago by ramiromagno
  0

• The most efficient way to retrieve association results by study_id?

  #31 opened 3 years ago by totajuliusd
  2

• Gwascatcollect<-function(gene, chr=xx, start=xx, end=xx)

  #29 opened 3 years ago by Shicheng-Guo
  3

• GRASP: Genome-Wide Repository of Associations Between SNPs and Phenotypes

  #30 opened 3 years ago by Shicheng-Guo
  4

• Response code 500 when using get_studies()

  #25 opened 3 years ago by mightyphil2000
  8

• Fix documentation of `cytogenetic_bands`

  #15 opened 3 years ago by ramiromagno
  0

• Link association_id, study_id and ancestry_id

  #10 opened 3 years ago by mightyphil2000
  7

• Is it possible to add additional gene information?

  #24 opened 3 years ago by peranti
  4

• Extract other information using gwasrapidd

  #23 opened 3 years ago by jiyue1214
  1

• NCBI build conversion

  #22 opened 3 years ago by jinjinzhou
  8

• get_associations using reported trait

  #19 opened 4 years ago by mightyphil2000
  7

• Retrieve all genetic associations searching on reported trait and efo simultaneously

  #21 opened 4 years ago by mightyphil2000
  7

• discrepancies between get_variant and get_association

  #20 opened 4 years ago by mightyphil2000
  10

• Very Small P Values are Rounded to 0

  #18 opened 4 years ago by MattCloward
  2

• Update documentation of `exists_variant()`

  #14 opened 4 years ago by ramiromagno
  0

• Functions for identifier mapping needed

  #8 opened 4 years ago by ramiromagno
  0

• Unexpected error in get_variants_by_efo_id: Error: length(efo_trait) not greater than 0

  #16 opened 4 years ago by ramiromagno
  0

• Make functions that search by either `efo_trait` or `reported_trait` case sensitive again

  #17 opened 4 years ago by ramiromagno
  0

• Refactor parsing functions to use `purrr::pluck()`

  #3 opened 5 years ago by ramiromagno
  1

• Problems with ensembl_id

  #12 opened 4 years ago by abhiachoudhary
  15

• How to get non-unioned results when using a list as a parameter?

  #11 opened 4 years ago by MattCloward
  5

• Regular expression in function is_study_id no longer works for newest studies

  #9 opened 4 years ago by MattCloward
  3

• Error in as.vector(x) : no method for coercing this S4 class to a vector

  #7 opened 5 years ago by ramiromagno
  0

• "get_variants" query error

  #6 opened 5 years ago by tzup
  5

• Bug in example

  #5 opened 5 years ago by jennysjaarda
  6

• `cols` is now required. Please use `cols

  #4 opened 5 years ago by ramiromagno
  0

• get_snp_by_id and get_snp_by_location not working for rs35252396 and rs6470588

  #1 opened 6 years ago by ramiromagno
  1