ramses-antibiotics/ramses-package

Issues

• [REQ] Longitudinal table

  #119 opened 6 months ago by peterdutey
  0

• [REQ] Database schema, naming convention and documentation

  #118 opened 6 months ago by peterdutey
  0

• method for function ‘longitudinal_table’ for signature ‘"Patient"’

  #112 opened a year ago by HOUSTONHA
  1

• validate_prescriptions too sensitive

  #55 opened 4 years ago by peterdutey
  1

• Remove tally table

  #111 opened 2 years ago by peterdutey
  0

• Better bridge tables

  #109 opened 2 years ago by peterdutey
  0

• Bug when all prescription_end are missing at therapy episode build

  #113 opened a year ago by peterdutey
  0

• Allow users to narrow down prescription set to show on timeline

  #107 opened 2 years ago by peterdutey
  0

• Antibiotic spectrum

  #79 opened 3 years ago by peterdutey
  0

• Continuous medication orders

  #70 opened 3 years ago by peterdutey
  0

• Define how to store 'no growth' results

  #108 opened 2 years ago by peterdutey
  0

• Add antiinfective_type to bridge tables

  #76 opened 2 years ago by peterdutey
  0

• bridge tables: be more conservative over data wrangling

  #104 opened 2 years ago by peterdutey
  0

• load_inpatient_diagnoses

  #59 opened 2 years ago by peterdutey
  0

• therapy_timeline looking for dates in inpatient_diagnoses

  #103 opened 2 years ago by peterdutey
  0

• Consistent data masking

  #105 opened 2 years ago by peterdutey
  1

• Start/end dates of inpatient diagnoses

  #74 opened 2 years ago by peterdutey
  1

• therapy rank is NA when there is only one prescription

  #95 opened 2 years ago by peterdutey
  0

• TherapyEpisodes of length > 3: object 'id' not found

  #100 opened 2 years ago by peterdutey
  0

• check clin feat OLS with multiple OBS code

  #98 opened 2 years ago by peterdutey
  0

• Document object methods

  #97 opened 2 years ago by peterdutey
  0

• Complete release v0.5.0

  #94 opened 2 years ago by peterdutey
  0

• Encounter S4 class

  #92 opened 2 years ago by peterdutey
  1

• Check TODO items

  #93 opened 2 years ago by peterdutey
  0

• Longitudinal table

  #86 opened 2 years ago by peterdutey
  1

• Therapy timeline

  #69 opened 2 years ago by emmavestesson
  1

• Adding same column to table

  #82 opened 2 years ago by peterdutey
  1

• Longitudinal table abx dose prescribed/administered feature

  #66 opened 3 years ago by peterdutey
  0

• validate_prescription

  #60 opened 2 years ago by peterdutey
  1

• Validation prescriptions

  #72 opened 3 years ago by peterdutey
  0

• Build therapy episodes without 'on hold' antibiotics

  #87 opened 2 years ago by peterdutey
  1

• Avoid error behaviour of clinical_features_*()

  #88 opened 2 years ago by peterdutey
  1

• map_charlson_comorbidities does not operate as intended on tbl_df

  #84 opened 2 years ago by peterdutey
  0

• validate_inpatient_episodes not enforcing unique patient_id

  #85 opened 2 years ago by peterdutey
  0

• Conform TherapyEpisode() to interface

  #83 opened 2 years ago by peterdutey
  0

• Unfinished therapies

  #65 opened 3 years ago by peterdutey
  0

• TherapyEpisode definition

  #63 opened 3 years ago by peterdutey
  0

• Verify main vignette

  #78 opened 3 years ago by peterdutey
  0

• validate_investigations - single measurement unit

  #75 opened 3 years ago by peterdutey
  0

• remove requirement for spell_id in inpatient_investigations

  #77 opened 3 years ago by peterdutey
  0

• Poor handling when observation_code does not exist in inpatient_investigations

  #80 opened 3 years ago by peterdutey
  1

• Bridge tables without DDDs

  #73 opened 3 years ago by peterdutey
  0

• Preparing prescriptions data

  #68 opened 3 years ago by emmavestesson
  2

• Therapy episodes

  #67 opened 3 years ago by emmavestesson
  1

• add ward dataframe description to doc

  #57 opened 3 years ago by peterdutey
  0

• verify silent arguments

  #56 opened 3 years ago by peterdutey
  0

• Vignette load-data.Rmd: add microbiology

  #64 opened 3 years ago by peterdutey
  0

• Antibiotic codes

  #61 opened 3 years ago by peterdutey
  0

• Identifier data type

  #62 opened 3 years ago by peterdutey
  0

• organism_id missing from susceptibilities schema

  #58 opened 4 years ago by peterdutey
  0