ranking-agent/strider

No results WFA2

Closed this issue · 0 comments

{
    "message": {
        "query_graph": {
            "edges": {
                "e01": {
                    "object": "n0",
                    "subject": "n1",
                    "predicates": [
                        "biolink:entity_regulates_entity",
                        "biolink:genetically_interacts_with"
                    ]
                },
                "e02": {
                    "object": "n1",
                    "subject": "n2",
                    "predicates": [
                        "biolink:related_to"
                    ]
                }
            },
            "nodes": {
                "n0": {
                    "ids": [
                        "NCBIGene:23221"
                    ],
                    "categories": [
                        "biolink:Gene"
                    ]
                },
                "n1": {
                    "categories": [
                        "biolink:Gene"
                    ]
                },
                "n2": {
                    "categories": [
                        "biolink:SmallMolecule"
                    ]
                }
            }
        }
    }
}

Strider returning no results. ARAX has 500 , etc.

The logs show these problems:

{
        "message": "Something went wrong while querying Biothings Explorer ReasonerStdAPI",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.472357",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying Connections Hypothesis Provider API",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.444255",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying Automat Covidkop KG (trapi v-1.2.0)",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.415276",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying Automat Robokop KG (trapi v-1.2.0)",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.389426",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying Automat Hetio (trapi v-1.2.0)",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.335356",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying CAM-KP API",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.305191",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying SPOKE KP for TRAPI 1.2",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.277452",
        "level": "WARNING"
    },
    {
        "message": "Something went wrong while querying RTX KG2",
        "error": "'NoneType' object has no attribute 'replace'",
        "timestamp": "2021-09-19T17:20:03.248166",
        "level": "WARNING"
    },