ncats-translator
There are 105 repositories under ncats-translator topic.
webyrd/mediKanren
Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.
biolink/biolink-model
Schema and generated objects for biolink data model and upper ontology
biothings/mygene.info
MyGene.info: A BioThings API for gene annotations
biolink/kgx
KGX is a Python library for exchanging Knowledge Graphs
biothings/myvariant.info
MyVariant.info: A BioThings API for human variant annotations
SuLab/DrugMechDB
A database of paths that represent the mechanism of action from a drug to a disease in an indication.
biothings/biothings.api
BioThings API framework - Making high-performance API for biological annotation data
INCATools/ubergraph
Integrated OBO ontology store
namin/biohacker
debugging biological networks to reach coherence, completeness and consistency
RTXteam/RTX-KG2
Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
RTXteam/RTX
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
SmartAPI/smartAPI
Intelligent APIs for a more connected web: https://smart-api.info
biolink/biolink-model-toolkit
A collection of useful python functions for looking up information and working with the Biolink Model
biothings/mychem.info
MyChem.info: A BioThings API for chemical/drug annotations
wikipathways/pathway-figure-ocr
Extracting gene sets from published pathway figures
biothings/biothings_explorer_archived
BioThings Explorer: a schema-based client for API interoperability
NCATS-Tangerine/translator-api-registry
This repo hosts the API metadata for the Translator project
biothings/biothings_explorer
TRAPI service for BioThings Explorer
TranslatorSRI/NodeNormalization
Service that produces Translator compliant nodes given a curie
TranslatorSRI/Babel
Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
broadinstitute/depmap-api
API access for DepMap data
NCATS-Tangerine/tranql
A Translator Query Language
NCATS-Tangerine/translator-knowledge-beacon
NCATS Translator Knowledge Beacon Application Programming Interface plus Sample code
broadinstitute/reasoner
Reasoner
biothings/biothings_explorer_web_old
Web Interface for BioThings Explorer
NCATSTranslator/Relay
Autonomous relay system for NCATS Biomedical Data Translator
NCATS-Tangerine/tkbio
NCATS Translator Release 4.0 of Knowledge.Bio as a distributed knowledge map management platform
ranking-agent/aragorn
A Translator ARA combining asynchronous database querying, answer coalescence, and answer ranking.
TranslatorSRI/reasoner-pydantic
Pydantic models for the Reasoner API data formats
ExposuresProvider/cam-kp-api
Web service API for the NCATS Data Translator CAM-KP
NCATSTranslator/TranslatorTechnicalDocumentation
Official Developer Documentation repository for the Biomedical Data Translator
TranslatorSRI/NameResolution
A service for finding CURIEs from lexical strings.