ncats-translator
There are 105 repositories under ncats-translator topic.
ranking-agent/strider
A TRAPI-compliant component of ARAGORN that queries distributed KPs and assembles answers to user questions.
biothings/call-apis.js
A nodejs module to make API calls for BioThings Explorer
broadinstitute/sharpener
Gene-sharpener API
ExposuresProvider/cam-pipeline
Data loading pipeline for CAM database
NCATS-Infrared/gnbr-neo4j-database
Scripts for downloading, formatting, deploying GNBR neo4j instance
NCATS-Tangerine/beacon-aggregator
A web service that operates over the Beacon network to provide a single software interface over the all the Beacons
NCATS-Tangerine/biolink-beacon
Monarch Biolink Knowledge Beacon implementation (as a Python Flask application)
NCATSTranslator/KnowledgeProviderScaffold
Example Responses and Documentation for Knowledge Providers
ranking-agent/AnswerCoalesce
A TRAPI-compliant component of ARAGORN that groups together similar results.
suihuanglab/improving-agent
An Autonomous Reasoning Agent in the NCATS Biomedical Translator Network that uses EHR and multi-omic cohorts to rank results from user queries
TranslatorSRI/BLComplianceService
Validates a ReasonerAPI message for BioLink compliance
biothings/api-respone-transform.js
A NodeJS library to transform API response into biolink model
biothings/biomedical_id_resolver.js
js library for converting biological ids in batch
biothings/biothings_resolver
A BioThings project for resolving identifiers among biological entities (aka "biothings")
biothings/bte_trapi_query_graph_handler
Module to handle TRAPI query and return TRAPI response
broadinstitute/gene_knockout_correlation
API access to gene knockout correlations based on Cancer Dependency Map (DepMap) data
broadinstitute/sharpener-common-to-rare-disease-gene-producer
Common-to-rare disease gene-list producer
NCATS-Infrared/gnbr-beacon-api
Global Network Derived from Text API system
NCATS-Tangerine/HMDB-knowledge-beacon
Knowledge beacon for the Human Metabolome Database
NCATS-Tangerine/mvp-module-library
Collection of modules for executing MVP Workflows
NCATS-Tangerine/stringdb-beacon
Knowledge Beacon Wrapper for the StringDb resource (https://string-db.org/)
TomConlin/Semantic_Exchange_Format
Exploring what I need from a semantic graph fragment exchange format
TranslatorSRI/ontology-kp
Translator Knowledge Provider for ontology triples
TranslatorSRI/Plater
Plater automatically creates a TRAPI interface for a biolink-compliant neo4j graph.
biothings/bte-trapi-workspace
A npm workspace setup for local development environment with all biothings explorer nodejs packages
NCATSTranslator/TranslatorPM
Activities related to the overall project management for Translator
ranking-agent/aragorn-ranker
Exposes TRAPI functions to add literature co-occurrence edges, convert publications to edge weights, and provide scores for answers.
ranking-agent/reasoner-transpiler
A library for converting TRAPI queries into cypher queries, taking into account the biolink predicate hierarchy
ranking-agent/robogallery
A collection of examples for the ranking-agent translator ecosystem
biothings/biolink-model.js
A nodejs library to consume biolink model
biothings/biothings_explorer_graphql
GraphQL app for BioThings Explorer
biothings/smartapi-kg.js
A nodejs library for generate knowledge graphs based on SmartAPI Specifications
biothings/transform-api-response.js
A nodejs library to transform API responses into biolink model