ExposuresProvider/cam-pipeline

Issues

• Increase number of parallel jobs

  #160 opened 3 months ago by gaurav
  1

• Add a `clean` target to the Makefile

  #158 opened 4 months ago by gaurav
  0

• Make an additional CAM-KP Frontend for interactions

  #157 opened 4 months ago by gaurav
  0

• Some edges appear to be getting dropped between the TSV and CAM-KP

  #156 opened 4 months ago by gaurav
  0

• Why does ctd-to-owl add a gene expression node here?

  #155 opened 4 months ago by gaurav
  0

• Document models that are good demonstrations of what CAM-KP does

  #153 opened 4 months ago by gaurav
  0

• CAM-KP Frontend suggestions

  #154 opened 4 months ago by gaurav
  0

• Get rid of "reverse" flag in CAM-KP Frontend

  #152 opened 4 months ago by gaurav
  0

• Add a post-data report generation to cam-pipeline

  #151 opened 5 months ago by gaurav
  1

• Build a Translator Test to CAM-KP use-case pipeline

  #150 opened 5 months ago by gaurav
  0

• Add qualifiers

  #145 opened 5 months ago by gaurav
  1

• Regenerate cam-pipeline-tools

  #149 opened 5 months ago by gaurav
  0

• Many MeSH identifiers are reported as being unmapped

  #147 opened 5 months ago by gaurav
  0

• Add support for bulk queries to the CAM-KP Frontend

  #142 opened 6 months ago by gaurav
  0

• Allow 3+ way queries in CAM-KP Frontend

  #140 opened 7 months ago by gaurav
  0

• Feedback to the frontend from Meisha

  #137 opened 8 months ago by gaurav
  0

• Consider adding `source_record_urls` to edges

  #136 opened 8 months ago by gaurav
  0

• Simple Noctua model looks very complex in the CAM-KP Frontend

  #135 opened 8 months ago by gaurav
  1

• Add export button for the CAM KP Frontend

  #144 opened 6 months ago by gaurav
  0

• Modify the frontend to sort models by descending number of nodes

  #134 opened 8 months ago by gaurav
  2

• Some model URLs don't work in the frontend

  #133 opened 8 months ago by gaurav
  1

• De-duplicate model URLs in CAM-KP Frontend

  #141 opened 7 months ago by gaurav
  1

• Add ability to look up a CAM by URL in the frontend

  #132 opened 8 months ago by gaurav
  0

• Add a README file to the example CAM-pipeline examples folder

  #129 opened 9 months ago by gaurav
  0

• Figure out everything we can connect to the 28 genes of interest to the ICEES/ROBOKOP work

  #128 opened 9 months ago by gaurav
  6

• Collect models into a single directory

  #125 opened 9 months ago by gaurav
  3

• Rewrite Kubernetes files

  #124 opened 9 months ago by gaurav
  1

• Add continuous tests to make sure CAM-KP stays online

  #143 opened 6 months ago by gaurav
  0

• Improve tests for two Automat-CAM-KP endpoints

  #123 opened 9 months ago by gaurav
  0

• Improve infores:aop-cam page

  #122 opened 9 months ago by gaurav
  0

• Consider how the treats refactor affects our data modeling

  #120 opened 10 months ago by gaurav
  0

• Setting agent_type and knowledge_level for edges

  #117 opened 10 months ago by gaurav
  1

• Express CAM results as aux graphs

  #116 opened 10 months ago by karafecho
  2

• Add cam-kp-api Example Queries to the test suite

  #114 opened a year ago by gaurav
  0

• Provide evidence that your tools can reliably support 20 sequential queries with a maximum of 10 seconds pause between each query

  #113 opened a year ago by gaurav
  0

• Group results by provenances

  #110 opened a year ago by gaurav
  0

• Continue poking ARS to remove all direct references to CAM

  #105 opened 6 months ago by gaurav
  1

• update Translator wiki page with current architecture

  #102 opened a year ago by balhoff
  2

• map RO terms to qualified Biolink predicates

  #95 opened a year ago by balhoff
  2

• Investigate why some identifiers aren't being normalized and report to NodeNorm

  #93 opened 2 years ago by gaurav
  1

• `biolink:same_as` connects Automat CAM-KP nodes with themselves

  #92 opened 2 years ago by gaurav
  1

• Deploy Automat-CAM-KP to RENCI and ITRB

  #90 opened 6 months ago by gaurav
  9

• Add tests for improving RO-to-Biolink mappings

  #96 opened a year ago by gaurav
  0

• Add description and maybe a wiki page for infores:go-cam

  #103 opened a year ago by gaurav
  1

• Update Automat-CAM-KP metadata

  #119 opened 10 months ago by gaurav
  0

• Update the URL for the wiki page returned by cam-kp

  #118 opened 7 months ago by karafecho
  10

• CAM KP does not respond to any of ICEES KG-derived input CURIES

  #101 opened a year ago by karafecho
  17

• Write tests for cam-pipeline

  #94 opened 9 months ago by gaurav
  1

• Make sure that it responds correctly to all the integration tests in CAM-KP-API repository

  #91 opened 2 years ago by gaurav
  1

• Unable to import ncbitaxon taxslim-disjoint-over-in-taxon.owl

  #99 opened a year ago by gaurav
  4