Features to add:
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Curl submission API ?
1. Get all samples from project 2. get all sample aliase & sample from search query
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Advanced Query capabilities
1. Nested Filter - Dynamically (multiple select vs <=>) ~~2. Aggragation counting~~
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Export to excel (project sample list, query result, dynamic & static phenotype)
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Build single sample edit page show/hide project edit, multi-select. likely make a partial for each dependancy. toggle section add/edit capability - return to reading upon save.
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~~Upload & update from Carriers AccessDB. No Longer Applys.~~
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Add a script to read run_info & sample_info to update NGS fields for samples already in db, limit by project to avoid Cross-id issues.
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Add sort to samples listing tables, add drop down column filter picker.
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Create Transaction table, to track in app changes, tied to specfic save capabilities.
Add change tracking to GUI interfaces [study_groups, ]
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Make save on study group page, all loop save, not just individual records.
9 Add link from sample page - to add new validation. 10 Add .ico
Things to Fix:
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redcap new not uploading Ovarian PDX correctly.
Please feel free to use a different markup language if you do not plan to run rake doc:app.
How to reset db and app.
rake db:drop:all rake db:migrate rake db:reset ## ALTER TABLE file_locations MODIFY location TEXT;
After Database Seed, runner scripts to build database from RedCap
## 1st new redcap rails runner lib/tasks/upload_newRedCap.rb -d <CouchRedcap.csv> ## 2nd old redcap rails runner lib/tasks/upload_OLD_redcap.rb
Additional SQL Helper
ALTER TABLE file_locations MODIFY location TEXT;