BEAST 2 based package for SNP analyses -- difussion based SNAPP.
- Install BEAST 2 (available from http://beast2.org).
- Install snapper package through the package manager (this automatically installs the SNAPP package as well)
Divergence-time estimation with SNAPPER presented by Michael Matschiner
Marnus Stoltz, Boris Bauemer, Remco Bouckaert, Colin Fox, Gordon Hiscott, David Bryant. Bayesian inference of species trees using diffusion models, Systematic Biology, 2020 DOI:10.1093/sysbio/syaa051
arXiv preprint arXiv:1909.07276, 2019.
BEAST user list: https://groups.google.com/forum/#!forum/beast-users
Marnus Stoltz: stoltzstep@gmail.com
David Bryant: david.bryant@otago.ac.nz