A pairwise alignment benchmark of a few libraries:
- Rust-bio
- Parasailors: https://github.com/anp/parasailors
- Block_aligner: https://github.com/Daniel-Liu-c0deb0t/block-aligner
- Libwfa: https://github.com/chfi/rs-wfa/
- Wfa2: https://github.com/tanghaibao/rust-wfa2
- ksw2: https://github.com/lh3/ksw2
- Scrooge: https://github.com/CMU-SAFARI/Scrooge
Speed test: cargo bench
Alignment test: cargo test -- --show-output
