/Epithelium-Thickness-ImageJ

Measure thickness distribution of binary image in Fiji

Primary LanguageImageJ MacroMIT LicenseMIT

Motivations

The aim of this macro is to measure the distribution of thickness of an epithelium pre-segmented. The distance map is being measured, and the skeleton of the map is plotted in a histogram in order to obtain the distribution of thickness along the middle line.

How to install

To run, just drop the macro and the binary image in Fiji and click on Run. Copy the TurboBlackBG.lut file in the LUT folder of Fiji.

Requirements

This macro doesnt require any additional plugin or macro.

Citations

Updates history

(0.0.1) Tasks splitted into two buttons