rdrake98/dm

Examples notebooks and code using coppertop and bones, the dm library, and unit tests for coppertop, bones and dm

dm

Includes:

• the dm core library for coppertop and bones
• Jupyter notebooks and Python code examples using coppertop, bones and dm

Use this - https://nbviewer.jupyter.org - if github doesn't render properly.

E.g. https://nbviewer.jupyter.org/github/DangerMouseB/coppertop-bones-demo/blob/main/jupyter/think%20bayes/Ch%201%2C2%2C3%20-%20models.ipynb

Notebook dependencies and coppertop

I have matplotlib, plotnine, numpy, pandas, scipy, pymc3, etc, installed.

Install coppertop-bones-demo via python -m pip install coppertop-bones-dm. This also installs coppertop-bones.

Alternatively clone https://github.com/coppertop-bones/coppertop-bones and https://github.com/coppertop-bones/dm and ensure your PYTHONPATH is set to include the src folders, for example:

/Users/david/repos/github/coppertop-bones/coppertop/src 
/Users/david/repos/github/coppertop-bones/dm/src

Alternatively, you can manually set sys.path to include the coppertop-bones/src folder and then at the top of a notebook you can do the following:

from coppertop.core import ensurePath
'/Users/david/repos/github/coppertop-bones/dm/src' >> ensurePath       # <= set this to your path

The notebook should be good to go.