rdtarvin
Asst. Professor / Asst. Curator, UC Berkeley IB/MVZ. Researcher, programmer, evolutionary biologist
Berkeley, CA
Pinned Repositories
2015-07-01-esu
2016-04-29-ucsf
Workshop website for April 2016 Software Carpentry at UCSF
academic_site_workshop
Part of the Academic Website Workshop
amphibioscope
your daily amphibian-infused horoscope
cayman
Cayman is a Jekyll theme for GitHub Pages
datacarpentry
Data Carpentry workshop materials
IBS2019_Genomics-of-Biodiversity
This is the course website for the Genomics of Biodiversity workshop at the International Biogeography Society meeting in Quito, Ecuador.
RADseq_Quito_2017
RAD workshop in Quito for the XI Congreso Latinoamericano de Herpetología
sequence-manipulation
swc_UCSF_python
April 29 swc workshop at UCSF, python data and scripts
rdtarvin's Repositories
rdtarvin/IBS2019_Genomics-of-Biodiversity
This is the course website for the Genomics of Biodiversity workshop at the International Biogeography Society meeting in Quito, Ecuador.
rdtarvin/RADseq_Quito_2017
RAD workshop in Quito for the XI Congreso Latinoamericano de Herpetología
rdtarvin/sequence-manipulation
rdtarvin/swc_UCSF_python
April 29 swc workshop at UCSF, python data and scripts
rdtarvin/2015-07-01-esu
rdtarvin/2016-04-29-ucsf
Workshop website for April 2016 Software Carpentry at UCSF
rdtarvin/academic_site_workshop
Part of the Academic Website Workshop
rdtarvin/amphibioscope
your daily amphibian-infused horoscope
rdtarvin/cayman
Cayman is a Jekyll theme for GitHub Pages
rdtarvin/datacarpentry
Data Carpentry workshop materials
rdtarvin/fall2020_ib134
Repo for ib134 fall 2020 class code
rdtarvin/Genomics-Intro-workshop
All the materials for the Genomics intro workshop for Universidad de Los Andes, Nov-Dec 2015
rdtarvin/geomorph
Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-3-dimensions as well as 3D surfaces in the R statistical computing environment. This repository is dedicated to providing stable and beta versions between CRAN uploads
rdtarvin/grabbag
Various scripts I have written that seem useful
rdtarvin/HTseq-toolbox
Tools for short read high-throughut sequencing (a.k.a. 'next-gen sequencing')
rdtarvin/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
rdtarvin/python-novice-inflammation
Software Carpentry introduction to Python for novices using inflammation data.
rdtarvin/r-QTL_functions
A set of functions that improves data extraction and plotting from R/qtl. Especially useful for multiple traits.
rdtarvin/rdtarvin.github.io
Website 2.0
rdtarvin/seqcap_pop
A pipeline for de novo assembly of population-level sequence capture datasets.
rdtarvin/shell-novice
Software Carpentry introduction to the shell for novices.
rdtarvin/Shell_Intro_for_Transcriptomics
Intro Shell Course Designed as a Precursor for Bioinformatics Courses
rdtarvin/sub_scripts
rdtarvin/t3workshop
rdtarvin/tracktor
Python and OpenCV based object tracking software
rdtarvin/UTbiocomputing2015
Peer-led working group in Biological Computing at UT Austin, Spring 2015