<!DOCTYPE html>

<html>
  <head>
    <meta charset="utf-8" />
    <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

    <title>Reaktoro’s Jupyter Book</title>
    
  <!-- Loaded before other Sphinx assets -->
  <link href="_static/styles/theme.css?digest=1999514e3f237ded88cf" rel="stylesheet">
<link href="_static/styles/pydata-sphinx-theme.css?digest=1999514e3f237ded88cf" rel="stylesheet">

    
  <link rel="stylesheet"
    href="_static/vendor/fontawesome/5.13.0/css/all.min.css">
  <link rel="preload" as="font" type="font/woff2" crossorigin
    href="_static/vendor/fontawesome/5.13.0/webfonts/fa-solid-900.woff2">
  <link rel="preload" as="font" type="font/woff2" crossorigin
    href="_static/vendor/fontawesome/5.13.0/webfonts/fa-brands-400.woff2">

    <link rel="stylesheet" type="text/css" href="_static/pygments.css" />
    <link rel="stylesheet" href="_static/styles/sphinx-book-theme.css?digest=5115cc725059bd94278eecd172e13a965bf8f5a9" type="text/css" />
    <link rel="stylesheet" type="text/css" href="_static/togglebutton.css" />
    <link rel="stylesheet" type="text/css" href="_static/copybutton.css" />
    <link rel="stylesheet" type="text/css" href="_static/mystnb.css" />
    <link rel="stylesheet" type="text/css" href="_static/sphinx-thebe.css" />
    <link rel="stylesheet" type="text/css" href="_static/tabs.css" />
    <link rel="stylesheet" type="text/css" href="_static/customized_mystnb.css" />
    <link rel="stylesheet" type="text/css" href="_static/design-style.b7bb847fb20b106c3d81b95245e65545.min.css" />
    
  <!-- Pre-loaded scripts that we'll load fully later -->
  <link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=1999514e3f237ded88cf">

    <script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
    <script src="_static/jquery.js"></script>
    <script src="_static/underscore.js"></script>
    <script src="_static/doctools.js"></script>
    <script src="_static/clipboard.min.js"></script>
    <script src="_static/copybutton.js"></script>
    <script src="_static/scripts/sphinx-book-theme.js?digest=9c920249402e914e316237a7dbc6769907cce411"></script>
    <script src="_static/tabs.js"></script>
    <script>let toggleHintShow = 'Click to show';</script>
    <script>let toggleHintHide = 'Click to hide';</script>
    <script>let toggleOpenOnPrint = 'true';</script>
    <script src="_static/togglebutton.js"></script>
    <script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
    <script src="_static/customize.js"></script>
    <script>var togglebuttonSelector = '.toggle, .admonition.dropdown, .tag_hide_input div.cell_input, .tag_hide-input div.cell_input, .tag_hide_output div.cell_output, .tag_hide-output div.cell_output, .tag_hide_cell.cell, .tag_hide-cell.cell';</script>
    <script src="_static/design-tabs.js"></script>
    <script>const THEBE_JS_URL = "https://unpkg.com/thebe@0.8.2/lib/index.js"
const thebe_selector = ".thebe,.cell"
const thebe_selector_input = "pre"
const thebe_selector_output = ".output, .cell_output"
</script>
    <script async="async" src="_static/sphinx-thebe.js"></script>
    <link rel="canonical" href="https://reaktoro.org/README.html" />
    <link rel="shortcut icon" href="_static/reaktoro-logo.svg"/>
    <link rel="index" title="Index" href="genindex.html" />
    <link rel="search" title="Search" href="search.html" />
    <meta name="viewport" content="width=device-width, initial-scale=1" />
    <meta name="docsearch:language" content="None">
    

    <!-- Google Analytics -->
    
<script async="" src="https://www.googletagmanager.com/gtag/js?id=G-PK3LGVLSKH"></script>
<script>
                    window.dataLayer = window.dataLayer || [];
                    function gtag(){ dataLayer.push(arguments); }
                    gtag('js', new Date());
                    gtag('config', 'G-PK3LGVLSKH');
                </script>

  </head>
  <body data-spy="scroll" data-target="#bd-toc-nav" data-offset="60">
<!-- Checkboxes to toggle the left sidebar -->
<input type="checkbox" class="sidebar-toggle" name="__navigation" id="__navigation" aria-label="Toggle navigation sidebar">
<label class="overlay overlay-navbar" for="__navigation">
    <div class="visually-hidden">Toggle navigation sidebar</div>
</label>
<!-- Checkboxes to toggle the in-page toc -->
<input type="checkbox" class="sidebar-toggle" name="__page-toc" id="__page-toc" aria-label="Toggle in-page Table of Contents">
<label class="overlay overlay-pagetoc" for="__page-toc">
    <div class="visually-hidden">Toggle in-page Table of Contents</div>
</label>
<!-- Headers at the top -->
<div class="announcement header-item noprint">🚀 Reaktoro v2 is finally out, after so many release candidates! This is the result of intense work over the last three years. Please let us know how to improve Reaktoro!</div>
<div class="header header-item noprint"></div>

    
    <div class="container-fluid" id="banner"></div>

    

    <div class="container-xl">
      <div class="row">
          
<!-- Sidebar -->
<div class="bd-sidebar noprint" id="site-navigation">
    <div class="bd-sidebar__content">
        <div class="bd-sidebar__top"><div class="navbar-brand-box">
    <a class="navbar-brand text-wrap" href="index.html">
      
        <!-- `logo` is deprecated in Sphinx 4.0, so remove this when we stop supporting 3 -->
        
      
      
      <img src="_static/reaktoro-for-python-and-cpp.svg" class="logo" alt="logo">
      
      
    </a>
</div><form class="bd-search d-flex align-items-center" action="search.html" method="get">
  <i class="icon fas fa-search"></i>
  <input type="search" class="form-control" name="q" id="search-input" placeholder="Search this book..." aria-label="Search this book..." autocomplete="off" >
</form><nav class="bd-links" id="bd-docs-nav" aria-label="Main">
    <div class="bd-toc-item active">
        
        <ul class="nav bd-sidenav bd-sidenav__home-link">
            <li class="toctree-l1">
                <a class="reference internal" href="index.html">
                    Reaktoro
                </a>
            </li>
        </ul>
        <p aria-level="2" class="caption" role="heading">
 <span class="caption-text">
  Get Started
 </span>
</p>
<ul class="nav bd-sidenav">
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="installation/index.html">
   Installation
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-1" name="toctree-checkbox-1" type="checkbox"/>
  <label for="toctree-checkbox-1">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="installation/installation-using-conda.html">
     Installation using Conda
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="installation/installation-using-cmake.html">
     Installation using CMake
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="installation/installation-in-google-colab.html">
     Installation in Google Colab
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1">
  <a class="reference external" href="https://reaktoro.org/api">
   API Reference
  </a>
 </li>
 <li class="toctree-l1">
  <a class="reference external" href="https://reaktoro.org/v1">
   Reaktoro v1
  </a>
 </li>
</ul>
<p aria-level="2" class="caption" role="heading">
 <span class="caption-text">
  Tutorials
 </span>
</p>
<ul class="nav bd-sidenav">
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="tutorials/basics/index.html">
   Basics
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" type="checkbox"/>
  <label for="toctree-checkbox-2">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/importing-reaktoro.html">
     Importing Reaktoro
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/loading-databases.html">
     Loading thermodynamic databases
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/inspecting-databases.html">
     Inspecting thermodynamic databases
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/defining-chemical-systems.html">
     Defining chemical systems
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/creating-chemical-states.html">
     Creating chemical states
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/computing-chemical-properties.html">
     Computing chemical properties
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/computing-aqueous-properties.html">
     Computing aqueous properties
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/computing-thermo-props-of-species.html">
     Computing standard thermodynamic properties of species
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/computing-thermo-props-of-reactions.html">
     Computing standard thermodynamic properties of reactions
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/specifying-activity-models.html">
     Specifying activity models
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/basics/defining-materials.html">
     Defining materials
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="tutorials/equilibrium/index.html">
   Chemical Equilibrium
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-3" name="toctree-checkbox-3" type="checkbox"/>
  <label for="toctree-checkbox-3">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-basics.html">
     Chemical equilibrium: the basics
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-specifying-constraints.html">
     Chemical equilibrium with constraints
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-fixed-ph.html">
     Chemical equilibrium with fixed pH
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-fixed-ph-charge-balance.html">
     Chemical equilibrium with fixed pH and charge balance
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-fixed-phase-amount.html">
     Chemical equilibrium with fixed phase amount
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-fixed-fugacity.html">
     Chemical equilibrium with fixed fugacity
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-fixed-volume-internal-energy.html">
     Chemical equilibrium with fixed volume and internal energy
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-custom-constraints.html">
     Chemical equilibrium with custom constraints
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/equilibrium/equilibrium-with-given-component-amounts.html">
     Chemical equilibrium with given element and charge amounts
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="tutorials/kinetics/index.html">
   Chemical Kinetics
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-4" name="toctree-checkbox-4" type="checkbox"/>
  <label for="toctree-checkbox-4">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/kinetics/kinetics-basics.html">
     Chemical kinetics: the basics
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/kinetics/kinetics-minerals-using-palandri-kharaka-model.html">
     Chemical kinetics for mineral reactions using Palandri-Kharaka model
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/kinetics/kinetics-minerals-custom-surface-area-models.html">
     Chemical kinetics for mineral reactions using custom surface area models
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="tutorials/machine-learning/index.html">
   Machine Learning
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-5" name="toctree-checkbox-5" type="checkbox"/>
  <label for="toctree-checkbox-5">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/machine-learning/machine-learning-basics.html">
     Machine learning: the basics
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="tutorials/advanced/index.html">
   Advanced
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-6" name="toctree-checkbox-6" type="checkbox"/>
  <label for="toctree-checkbox-6">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="tutorials/advanced/creating-custom-databases.html">
     Creating thermodynamic databases
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1">
  <a class="reference internal" href="tutorials/bibliography.html">
   Bibliography
  </a>
 </li>
</ul>
<p aria-level="2" class="caption" role="heading">
 <span class="caption-text">
  Applications
 </span>
</p>
<ul class="nav bd-sidenav">
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="applications/solubility/index.html">
   Solubility
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-7" name="toctree-checkbox-7" type="checkbox"/>
  <label for="toctree-checkbox-7">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/solubility/solubility-calcite-on-acidity-and-temperature.html">
     Calcite solubility in water, rainwater, and seawater
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/solubility/solubility-co2-on-salinity-and-temperature.html">
     Carbon-dioxide solubility in brines with different salinity and temperature
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="applications/geochemistry/index.html">
   Geochemistry
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-8" name="toctree-checkbox-8" type="checkbox"/>
  <label for="toctree-checkbox-8">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/ph-dependence-on-co2-addition-in-seawater.html">
     Carbon dioxide (CO₂) dissolution in seawater
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/ph-dependence-on-contaminants-in-water.html">
     pH-dependence on added contaminants in water
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/evian-water-analysis.html">
     Analysis of the Evian water
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/opening-bottle-with-sparkling-water.html">
     Opening bottle with sparkling water
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/uraniun-speciation-vs-pH.html">
     Uranium (VI) speciation as a function of pH at fixed CO
     <sub>
      2
     </sub>
     partial pressure
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/cement-simulation-with-solid-solutions.html">
     The effect of limestone addition on a hydrated cement mix
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/ion-exchange-dune-sand.html">
     Ion exchange in dune sand and groundwater
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/ion-exchange-mix-porewater-extractant.html">
     Extraction of exchangeable cations in dune sand
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/ion-exchange-cax2-nax-kx-vs-changing-ca-k.html">
     Cation exchange competition among Na
     <sup>
      +
     </sup>
     , K
     <sup>
      +
     </sup>
     and Ca
     <sup>
      2+
     </sup>
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geochemistry/ion-exchange-calcite-cax-vs-ph.html">
     Effect of calcite dissolution on exchangeable cations
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="applications/geobiology/index.html">
   Geobiology
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-9" name="toctree-checkbox-9" type="checkbox"/>
  <label for="toctree-checkbox-9">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geobiology/geobiology-streammodel-fixed-fugacity.html">
     Carbonate-rich lakes modeling on the early Earth
    </a>
   </li>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/geobiology/geobiology-phreeqc-fixed-fugacity.html">
     Phosphate accumulation in carbonate-rich brines
    </a>
   </li>
  </ul>
 </li>
 <li class="toctree-l1 has-children">
  <a class="reference internal" href="applications/biomass-gasification/index.html">
   Biomass Gasification
  </a>
  <input class="toctree-checkbox" id="toctree-checkbox-10" name="toctree-checkbox-10" type="checkbox"/>
  <label for="toctree-checkbox-10">
   <i class="fas fa-chevron-down">
   </i>
  </label>
  <ul>
   <li class="toctree-l2">
    <a class="reference internal" href="applications/biomass-gasification/biomass-gasification.html">
     Biomass Gasification
    </a>
   </li>
  </ul>
 </li>
</ul>
<p aria-level="2" class="caption" role="heading">
 <span class="caption-text">
  General
 </span>
</p>
<ul class="nav bd-sidenav">
 <li class="toctree-l1">
  <a class="reference internal" href="general/citing.html">
   Citing
  </a>
 </li>
 <li class="toctree-l1">
  <a class="reference internal" href="general/faq.html">
   FAQ
  </a>
 </li>
 <li class="toctree-l1">
  <a class="reference internal" href="general/troubleshooting.html">
   Troubleshooting
  </a>
 </li>
 <li class="toctree-l1">
  <a class="reference internal" href="general/contributing.html">
   Contributing
  </a>
 </li>
 <li class="toctree-l1">
  <a class="reference internal" href="general/license.html">
   License
  </a>
 </li>
 <li class="toctree-l1">
  <a class="reference internal" href="general/development.html">
   Development
  </a>
 </li>
</ul>

    </div>
</nav></div>
        <div class="bd-sidebar__bottom">
             <!-- To handle the deprecated key -->
            
            <div class="navbar_extra_footer">
            Powered by <a href="https://jupyterbook.org">Jupyter Book</a>
            </div>
            
        </div>
    </div>
    <div id="rtd-footer-container"></div>
</div>


          


          
<!-- A tiny helper pixel to detect if we've scrolled -->
<div class="sbt-scroll-pixel-helper"></div>
<!-- Main content -->
<div class="col py-0 content-container">
    
    <div class="header-article row sticky-top noprint">
        



<div class="col py-1 d-flex header-article-main">
    <div class="header-article__left">
        
        <label for="__navigation"
  class="headerbtn"
  data-toggle="tooltip"
data-placement="right"
title="Toggle navigation"
>
  

<span class="headerbtn__icon-container">
  <i class="fas fa-bars"></i>
  </span>

</label>

        
    </div>
    <div class="header-article__right">
<button onclick="toggleFullScreen()"
  class="headerbtn"
  data-toggle="tooltip"
data-placement="bottom"
title="Fullscreen mode"
>
  

<span class="headerbtn__icon-container">
  <i class="fas fa-expand"></i>
  </span>

</button>

<div class="menu-dropdown menu-dropdown-repository-buttons">
  <button class="headerbtn menu-dropdown__trigger"
      aria-label="Source repositories">
      <i class="fab fa-github"></i>
  </button>
  <div class="menu-dropdown__content">
    <ul>
      <li>
        <a href="https://github.com/reaktoro/reaktoro-jupyter-book"
   class="headerbtn"
   data-toggle="tooltip"
data-placement="left"
title="Source repository"
>
  

<span class="headerbtn__icon-container">
  <i class="fab fa-github"></i>
  </span>
<span class="headerbtn__text-container">repository</span>
</a>

      </li>
      
      <li>
        <a href="https://github.com/reaktoro/reaktoro-jupyter-book/issues/new?title=Issue%20on%20page%20%2FREADME.html&body=Your%20issue%20content%20here."
   class="headerbtn"
   data-toggle="tooltip"
data-placement="left"
title="Open an issue"
>
  

<span class="headerbtn__icon-container">
  <i class="fas fa-lightbulb"></i>
  </span>
<span class="headerbtn__text-container">open issue</span>
</a>

      </li>
      
      <li>
        <a href="https://github.com/reaktoro/reaktoro-jupyter-book/edit/main/README.md"
   class="headerbtn"
   data-toggle="tooltip"
data-placement="left"
title="Edit this page"
>
  

<span class="headerbtn__icon-container">
  <i class="fas fa-pencil-alt"></i>
  </span>
<span class="headerbtn__text-container">suggest edit</span>
</a>

      </li>
      
    </ul>
  </div>
</div>

<div class="menu-dropdown menu-dropdown-download-buttons">
  <button class="headerbtn menu-dropdown__trigger"
      aria-label="Download this page">
      <i class="fas fa-download"></i>
  </button>
  <div class="menu-dropdown__content">
    <ul>
      <li>
        <a href="_sources/README.md"
   class="headerbtn"
   data-toggle="tooltip"
data-placement="left"
title="Download source file"
>
  

<span class="headerbtn__icon-container">
  <i class="fas fa-file"></i>
  </span>
<span class="headerbtn__text-container">.md</span>
</a>

      </li>
      
      <li>
        
<button onclick="printPdf(this)"
  class="headerbtn"
  data-toggle="tooltip"
data-placement="left"
title="Print to PDF"
>
  

<span class="headerbtn__icon-container">
  <i class="fas fa-file-pdf"></i>
  </span>
<span class="headerbtn__text-container">.pdf</span>
</button>

      </li>
      
    </ul>
  </div>
</div>

    </div>
</div>

<!-- Table of contents -->
<div class="col-md-3 bd-toc show noprint">
</div>
    </div>
    <div class="article row">
        <div class="col pl-md-3 pl-lg-5 content-container">
            <!-- Table of contents that is only displayed when printing the page -->
            <div id="jb-print-docs-body" class="onlyprint">
                <h1>Reaktoro’s Jupyter Book</h1>
                <!-- Table of contents -->
                <div id="print-main-content">
                    <div id="jb-print-toc">
                        
                    </div>
                </div>
            </div>
            <main id="main-content" role="main">
                
              <div>
                
  <section class="tex2jax_ignore mathjax_ignore" id="reaktoro-s-jupyter-book">
<h1>Reaktoro’s Jupyter Book<a class="headerlink" href="#reaktoro-s-jupyter-book" title="Permalink to this headline">#</a></h1>
<p>This project documents how Reaktoro’s Python API can be used for several chemical modeling examples.</p>
<p>To build this project, follow the steps below, assuming you are in its root directory:</p>
<ol class="simple">
<li><p>Create a conda environment with <code class="docutils literal notranslate"><span class="pre">conda</span> <span class="pre">env</span> <span class="pre">create</span> <span class="pre">-f</span> <span class="pre">environment.yml</span></code></p></li>
<li><p>Activate the created environment <code class="docutils literal notranslate"><span class="pre">conda</span> <span class="pre">activate</span> <span class="pre">reaktoro-jupyter-book</span></code></p></li>
<li><p>Build the project with <code class="docutils literal notranslate"><span class="pre">jupyter-book</span> <span class="pre">build</span> <span class="pre">.</span></code></p></li>
</ol>
</section>

    <script type="text/x-thebe-config">
    {
        requestKernel: true,
        binderOptions: {
            repo: "binder-examples/jupyter-stacks-datascience",
            ref: "master",
        },
        codeMirrorConfig: {
            theme: "abcdef",
            mode: "python"
        },
        kernelOptions: {
            name: "python3",
            path: "./."
        },
        predefinedOutput: true
    }
    </script>
    <script>kernelName = 'python3'</script>

              </div>
              
            </main>
            <footer class="footer-article noprint">
                
    <!-- Previous / next buttons -->
<div class='prev-next-area'>
</div>
            </footer>
        </div>
    </div>
    <div class="footer-content row">
        <footer class="col footer"><p>
  
      &copy; Copyright 2023.<br/>
</p>
        </footer>
    </div>
    
</div>


      </div>
    </div>
  
  <!-- Scripts loaded after <body> so the DOM is not blocked -->
  <script src="_static/scripts/pydata-sphinx-theme.js?digest=1999514e3f237ded88cf"></script>


  </body>
</html>