Pinned Repositories
AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
awesome-bio-datasets
awesome-bio-datasets
BayesModa
pymc3 model for combining expert rater judgments from the MODA sleep spindle dataset.
bds-files
Supplementary files for my book, "Bioinformatics Data Skills"
berkeleydeeprlcource-homework
Assignments for CS294-112.
bioawk
BWK awk modified for biological data
bpadictionary
Data dictionary for the Blood PAC Commons
btMSI-CAST
CfdnaPattern
Pattern Recognition for Cell-free DNA
Coding-Guide
自己随手记录的东西
realityjunky's Repositories
realityjunky/bpadictionary
Data dictionary for the Blood PAC Commons
realityjunky/AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
realityjunky/awesome-bio-datasets
awesome-bio-datasets
realityjunky/BayesModa
pymc3 model for combining expert rater judgments from the MODA sleep spindle dataset.
realityjunky/berkeleydeeprlcource-homework
Assignments for CS294-112.
realityjunky/btMSI-CAST
realityjunky/Coding-Guide
自己随手记录的东西
realityjunky/cython
A Python to C compiler
realityjunky/dl-workshop
Crash course to master gradient-based machine learning. Also secretly a JAX course in disguise!
realityjunky/handson-ml
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.
realityjunky/homebrew-core
:beers: Core formulae for the Homebrew package manager
realityjunky/hts-specs
Specifications of SAM/BAM and related high-throughput sequencing file formats
realityjunky/jmcglone.github.io
Data for jmcglone.com. Includes customization of Bootstrap 3.0. Blog and pages generated by Jekyll. Hosted on GitHub.
realityjunky/miniBatch_test
realityjunky/mixed_hmc
realityjunky/mojombo.github.io
Jekyll source for my personal blog.
realityjunky/MrBam
Query Mutated Reads from a Bam
realityjunky/MutScan
Detect important mutations by scanning FastQ files directly
realityjunky/numpy-ml
Machine learning, in numpy
realityjunky/oncotator
realityjunky/OpenGene.jl
OpenGene, core libraries for NGS data analysis and bioinformatics in julia
realityjunky/PGMax
Loopy belief propagation for factor graphs on discrete variables in JAX
realityjunky/pymc
Bayesian Modeling and Probabilistic Programming in Python
realityjunky/realityjunky.github.io
realityjunky/resume
My CV/resume in LaTeX.
realityjunky/rtg-tools
RTG Tools: Utilities for accurate VCF comparison and manipulation
realityjunky/scikit-learn
scikit-learn: machine learning in Python
realityjunky/scvi-tools
Deep probabilistic analysis of single-cell omics data
realityjunky/sr2-solutions
Solutions to exercises and homework for the second edition of Statistical Rethinking
realityjunky/test
practicing