Pinned Repositories
cubiomes
C library that mimics the Minecraft biome generation.
follow_iron_golems
A behavior pack for Mincraft (Bedrock) that tracks statistics useful for iron farms.
leveldb-mcpe
A fork of Google's LevelDB with added zlib compression and windows support
mcberepair
A maintance toolset for Minecraft: Bedrock Edition world databases.
ngila
Ngila is a global alignment program that can align pairs of sequences using logarithmic and affine gap penalties.
rbedrock
R library for Minecraft Bedrock Edition.
spagedi
SPAGeDi: Spatial Pattern Analysis of Genetic Diversity
reedacartwright's Repositories
reedacartwright/spagedi
SPAGeDi: Spatial Pattern Analysis of Genetic Diversity
reedacartwright/ngila
Ngila is a global alignment program that can align pairs of sequences using logarithmic and affine gap penalties.
reedacartwright/archinformatics
Arch Linux PKGBUILDs for Bioinformatics
reedacartwright/denovogear
A program to detect denovo-variants using next-generation sequencing data. (http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html)
reedacartwright/adamjorr-talks
Talks I've given
reedacartwright/analysis
Analysis of inference methods on standard population models
reedacartwright/bossmachine
Bioinformatics Open Source Sequence machine
reedacartwright/CLI11
CLI11 is a command line parser for C++11 and beyond that provides a rich feature set with a simple and intuitive interface.
reedacartwright/CppNumericalSolvers
L-BFGS-B and other optimization implementation in pure C++11 using Eigen
reedacartwright/FontPro
LaTeX support for Adobe's Pro opentype fonts: Minion Pro, Myriad Pro, Cronos Pro and possibly more
reedacartwright/HumanIdiogramLibrary
Resource of human chromosome schematics & images
reedacartwright/ideapad-hacks
Yoga 920 fn-lock and conservation mode acpi platform driver
reedacartwright/lzbench
lzbench is an in-memory benchmark of open-source LZ77/LZSS/LZMA compressors
reedacartwright/manuscript
PopSim consortium manuscript
reedacartwright/McpeTool
get/put/delete cli and http API for Minecraft Pocket Edition world directories
reedacartwright/nbt2json
A command line utitlity and module that reads NBT data and converts it to JSON or YAML for editing and then back to NBT again
reedacartwright/pcangsd
Framework for analyzing low depth NGS data in heterogeneous populations using PCA.
reedacartwright/phylowgs
Application for inferring subclonal composition and evolution from whole-genome sequencing data.
reedacartwright/prank-msa
Automatically exported from code.google.com/p/prank-msa
reedacartwright/r
Using R with Jupyter / RStudio on Binder
reedacartwright/r-internals
Documentation for R's internal C API
reedacartwright/range_generator
Some variations on Lemire's Fast Random Integer Generation in an Interval
reedacartwright/referee
Reference genome quality scores
reedacartwright/shell-novice
Software Carpentry introduction to the shell for novices.
reedacartwright/so-simple-theme
:art: A simple and clean responsive Jekyll theme for words and photos.
reedacartwright/SoFoS
Rescale genetic polymorphism data to match a common sample size.
reedacartwright/sync-ports
A script to syncronize a local ports directory with the latest revision used to build FreeBSD packages.
reedacartwright/toycoati
An FST for generating pairwise alignments
reedacartwright/varroa-host-jump
Comparative genomics between Varroa destructor and Varroa jacobsoni to identify genetic mechanisms associated with the host switches from the Asian honey bee to the Western honey bee
reedacartwright/XGSA
XGSA: a statistical method for cross-species gene set analysis