Pinned Repositories
aws_igenomes
configuration for an iGenomes refgenieserver
deploy_guide
Information on deployed refgenieserver instances.
refgenconf
A Python object for standardized reference genome assets.
refgenie
Reference genome resource manager
refgenie_nfcore
Nextflow plugin for refgenie compatibility
refgenieserver
Serves a web interface and RESTful API for reference genome assets.
refgenomes.databio.org
Primary refgenieserver instance
refget
Python tools for identification and distribution of reference sequences and sequence collections
seqcol
Implementation of sequence collections
server_deploy_demo
Demo for deploying refgenieserver instance to AWS
Refgenie's Repositories
refgenie/refgenie
Reference genome resource manager
refgenie/refgenieserver
Serves a web interface and RESTful API for reference genome assets.
refgenie/refgenie_nfcore
Nextflow plugin for refgenie compatibility
refgenie/refget
Python tools for identification and distribution of reference sequences and sequence collections
refgenie/refgenconf
A Python object for standardized reference genome assets.
refgenie/aws_igenomes
configuration for an iGenomes refgenieserver
refgenie/refgenomes.databio.org
Primary refgenieserver instance
refgenie/btref.databio.org
Repository for building bowtie/bowtie2 indexes for refgenie
refgenie/deploy_guide
Information on deployed refgenieserver instances.
refgenie/refgenie_myplugin
A demo refgenie plugin
refgenie/seqcol
Implementation of sequence collections
refgenie/seqcolapi
refgenie/server_deploy_demo
Demo for deploying refgenieserver instance to AWS
refgenie/software_deploy_demo
A demo for automatic deploy of staging for software testing
refgenie/plantref
Refgenieserver content repository for plant genomes server
refgenie/recipes
recipes & asset classes definitions
refgenie/refgenie-docs
Documentation for refgenie components
refgenie/refgenie_looper_demo
Demo of how to use the refgenie plugin with looper
refgenie/rg.databio.org
refgenieserver instance for testing