Pinned Repositories
NGI_dashboards
SciLifeLab NGI Dashboard Code
adaptive_sampler_check
allpathslg
Dockerfile for the de novo assembler ALLPATHS-LG
anglerfish
Anglerfish - Nanopore reads from Illumina libraries
merged_nodups2bed
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
NBIS_HiC_curation_course_2022
NGI-RADseqQC
Moved to https://github.com/remiolsen/nf-core-radseq/
radQC
Pipeline for QC of RAD-seq data
genomics-status
Tornado server for tracking samples at NGI Stockholm
remiolsen's Repositories
remiolsen/NBIS_HiC_curation_course_2022
remiolsen/radQC
Pipeline for QC of RAD-seq data
remiolsen/anglerfish
Anglerfish - Nanopore reads from Illumina libraries
remiolsen/merged_nodups2bed
remiolsen/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
remiolsen/adaptive_sampler_check
remiolsen/10x_ont_technote-2024
remiolsen/3d-dna-docker
remiolsen/bioconda-recipes
Conda recipes for the bioconda channel.
remiolsen/docker-airsonic-advanced
remiolsen/dovetail-hichip-singularity
remiolsen/fast5mod-singularity
remiolsen/flames-docker
Unofficial docker image for flames
remiolsen/hicscaff
remiolsen/hpc-scripts
remiolsen/juicer-cpu-docker
remiolsen/mitoVGP
The Vertebrate Genomes Project Mitogenome Assembly Pipeline
remiolsen/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
remiolsen/nf-core-neutronstar
Main fork is here: https://github.com/SciLifeLab/NGI-NeutronStar
remiolsen/NGI-AS-tech_note-2024
remiolsen/NGI_dashboards
SciLifeLab NGI Dashboard Code
remiolsen/ngisweden.se
Wordpress theme and plugins for ngisweden.se
remiolsen/pairsam2mnd
remiolsen/pin_hic_singularity
remiolsen/pod5-docker
remiolsen/remiolsen-yahs
remiolsen/singularity-in-docker
A small repository with instructions on how to build Singularity images inside a Docker container.
remiolsen/status
remiolsen/strobealign-docker
Code dump
remiolsen/wf-single-cell