atac-seq-pipeline
ATAC-seq analysis pipeline
Dependencies
align-reads.py
call-atac.py
Usage: python run-idr.py [options] <expt prefix> <output dir> <genome sz>
Options:
-m : Use parameters manually specified in script.
This option will ignore following arguments.
run-idr.py
Usage: python call-atac.py [options] <input dir> <expt prefix> <output dir> <genome sz>
Options:
-m : Use parameters manually specified in script.
This option will ignore following arguments.