Research Applications

cvat

Powerful and efficient Computer Vision Annotation Tool (CVAT)

health-insurance-decision

A small notebook to walk through if shared or individual plans are a better choice

helpme-server

Collaborative knowledge and support for scientific computing

job-maker

a static web application for generating job submissions scripts for a SLURM cluster

polysolver

Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (HLA-A, -B, -C)

quantum_state_diffusion

Solving quantum state diffusion numerically.

red-docs-jekyll

documentation template for researchers

sherlock

repository for collaborating with sherlock users to create containers

url-headers

Container, scripts, and GitHub action to extract header metadata for sites.

usernetes

Kubernetes installable under $HOME, without the root privileges

researchapps/awscli-layer

Testing building a single layer into a container (the awscli)

researchapps/binaries

A repository with binaries for angr tests and examples.

researchapps/brainhack_cloud

researchapps/citelang-letters

Testing letters for citelang

researchapps/dashboard

A custom dashboard for displaying results from the Testsuite

researchapps/demo-shpc-nf

Demo RNAseq pipeline, to test interplay with SHPC container modules

researchapps/dive

A tool for exploring each layer in a docker image

researchapps/docker_minislurm

Docker base image for single node Slurm cluster

researchapps/dyninst-container

Developing a dyninst build -> test -> deploy (eventually will PR to dyninst/dyninst)

researchapps/dyninst-docs

preview (temporary) repository for dyninst docs preview

researchapps/flux-bugs

A place to reproduce bugs found in Flux (and then we can fix them!)

researchapps/flux-vis

Brainstorming ideas to visualize Flux resource graphs.

researchapps/gha-test

GHA test

researchapps/hatchet

Graph-indexed Pandas DataFrames for analyzing hierarchical performance data

researchapps/libraries.io

:books: The Open Source Discovery Service

researchapps/mfem-containers

researchapps/nix-serve

A standalone Nix binary cache server

researchapps/old

The Other Dynamic Linker

researchapps/oras-www

ORAS website and documentation

researchapps/pavilion2

Pavilion is a Python 3 (3.5+) based framework for running and analyzing tests targeting HPC systems.

researchapps/pictogram

:camera: A simple service to map human concepts to pictures. (assuming they are programming languages)

researchapps/pytest-md-report

A pytest plugin to make a test results report with Markdown table format.

researchapps/reframe

A powerful Python framework for writing and running portable regression tests and benchmarks for HPC systems.

researchapps/regclient

Docker and OCI Registry Client in Go and tooling using those libraries.

researchapps/runner

The Runner for GitHub Actions :rocket:

researchapps/scraper

Python library for getting metadata from source code hosting tools

researchapps/shpc-test-registry

Test remote registry for Singularity Registry HPC

researchapps/singularity-hpc-feedstock

A conda-smithy repository for singularity-hpc.

researchapps/spack

A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

researchapps/spdx-sbom-generator

Support CI generation of SBOMs via golang tooling.