Pinned Repositories
spacemake
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Cassiopeia
A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction
Multimodal-intersection-analysis-MIA-
Source code for MIA from Moncada et al Nature Biotechnology (2020)
openst
Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab
spacemake
stereoscope
Spatial mapping of cell types by integration of transcriptomics data
APA-Seq
reubenmoncada's Repositories
reubenmoncada/Multimodal-intersection-analysis-MIA-
Source code for MIA from Moncada et al Nature Biotechnology (2020)
reubenmoncada/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
reubenmoncada/Cassiopeia
A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction
reubenmoncada/openst
Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab
reubenmoncada/spacemake
reubenmoncada/stereoscope
Spatial mapping of cell types by integration of transcriptomics data