rhughwhite

Pinned Repositories

gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
Language:Python00
test
test git
00
docker-SAMtools
Dockerfile for samtools - a tools for "Reading/writing/editing/indexing/viewing SAM/BAM/CRAM format".
Language:Dockerfile0 6 60
package-ApplyPolygenicScore
Utilities for matching a polygenic score coordinate file to a VCF input and the subsequent calculation of the provided polygenic score in each individual.
Language:R00
package-BoutrosLab-plotting-general
Functions to Create Publication-Quality Plots
Language:R12 40 984
pipeline-call-sSV
Nextflow pipeline to call somatic structural variants using DELLY and Manta
Language:Groovy2 5 810
pipeline-recalibrate-BAM
Nextflow pipeline to perform Indel Realignment and Base Quality Score Recalibration
Language:Nextflow1 3 211
prostate-cancer-m6a-paper
Code for "The Landscape of N6-Methyladenosine in Localized Primary Prostate Cancer"
Language:R0 4 00

rhughwhite's Repositories

rhughwhite/gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
Language:Python00
rhughwhite/test
test git
00