Pinned Repositories
ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
appliedgenomics2020
Description Materials for Spring 2020 Applied Genomics Course
appliedgenomics2022
Materials for EN.601.449/EN.601.649 Computational Genomics: Applied Comparative Genomics
bioconda-recipes
Conda recipes for the bioconda channel.
circrna
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
cloud-shell-tutorials
fastqtl
Fork of FastQTL for SVs (to run on Minerva)
Pipeline-Standardization
sandbox
ricardovialle's Repositories
ricardovialle/ABC-Enhancer-Gene-Prediction
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
ricardovialle/ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
ricardovialle/appliedgenomics2020
Description Materials for Spring 2020 Applied Genomics Course
ricardovialle/appliedgenomics2022
Materials for EN.601.449/EN.601.649 Computational Genomics: Applied Comparative Genomics
ricardovialle/bioconda-recipes
Conda recipes for the bioconda channel.
ricardovialle/circrna
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
ricardovialle/cloud-shell-tutorials
ricardovialle/fastqtl
Fork of FastQTL for SVs (to run on Minerva)
ricardovialle/Pipeline-Standardization
ricardovialle/sandbox
ricardovialle/singularity-rstudio
RStudio Server in a Singularity container
ricardovialle/singularity-rstudio-r4
ricardovialle/starter-hugo-project-documentation
ricardovialle/suez
R package for mapping response-expression QTLs
ricardovialle/WGS-QC-Pipeline
A Snakemake pipeline for Quality Control of Whole Genome Sequencing data
ricardovialle/Ydb
ricardovialle/wrangling-genomics
Data Wrangling and Processing for Genomics