Pinned Repositories
RegulonDB-HT
arangs2015
Repository for Automated and Reproducible Analysis of NextGen Sequence 2015
biohackathon-projects-2024
Project code for BioHackathon Europe 2024.
docker-images
This repository holds Dockerfiles to be used with the gene-regulation repository of NGS workflows.
EcoliGenes
Get E. coli genes and TFs IDs, convert and manipulate them; update genomic coordinates
gene-regulation
This project has moved and will no longer be edited here. New link ->
NetworkEval
Evaluate network predictions in E. coli
presentations
RegulonDB_healthcheck
Revision of the congruency in downloadable files from different releases
rioualen.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
rioualen's Repositories
rioualen/gene-regulation
This project has moved and will no longer be edited here. New link ->
rioualen/docker-images
This repository holds Dockerfiles to be used with the gene-regulation repository of NGS workflows.
rioualen/NetworkEval
Evaluate network predictions in E. coli
rioualen/presentations
rioualen/rioualen.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
rioualen/arangs2015
Repository for Automated and Reproducible Analysis of NextGen Sequence 2015
rioualen/biohackathon-projects-2024
Project code for BioHackathon Europe 2024.
rioualen/BioHackEU23_preprint
Template for the report on project 32 from the BioHackathon Europe 2023 event - Barcelona, November 2023
rioualen/EcoliGenes
Get E. coli genes and TFs IDs, convert and manipulate them; update genomic coordinates
rioualen/RegulonDB_healthcheck
Revision of the congruency in downloadable files from different releases
rioualen/Ecoli_feature_set
rioualen/edamontology
EDAM is an ontology of bioscientific data analysis and data management. EDAM concentrates on topics, operations, types of data, and data formats related to analysis, modelling, optimisation, and data life-cycle in biosciences, and in other research and science-based applications.
rioualen/edamverify
Next-generation EDAM quality-control utility
rioualen/regutools
R package to extract and process data from RegulonDB
rioualen/SalmoGenes
rioualen/spp-idr
Wrappers around NGS peak callers to both call peaks and run IDR