Pinned Repositories
benchmarks
HPC Benchmarks for most popular applications in Chemistry, Physics, Biology, and some other related subjects
blastdbget
Download Blast databases from ftp.ncbi.nlm.nih.gov/blast/db, validate, and extract.
CharlesScripts
My awesome scripts for Arch Linux or Ubuntu Gnome latest LTS or MacBook.
Command-line-text-processing
From finding text to search and replace, from sorting to beautifying text and more
DFTworkshop
dotfiles
:wrench: .files, including ~/.macos — sensible hacker defaults for macOS
dv
Disk Usage Visualization
orca-scripts
Various scripts that I have collected from around the web for interacting with the ORCA electronic structure suit. Many of these scripts are from the Orca Input Library, but I intend to collect any script I find or write, license permitting, for working with this fantastic application for doing atomic orbital based DFT and other ab initio electronic structure
pbs-scripts
My PBS submission scripts for CARC machines.
rjohns03's Repositories
rjohns03/pbs-scripts
My PBS submission scripts for CARC machines.
rjohns03/dv
Disk Usage Visualization
rjohns03/orca-scripts
Various scripts that I have collected from around the web for interacting with the ORCA electronic structure suit. Many of these scripts are from the Orca Input Library, but I intend to collect any script I find or write, license permitting, for working with this fantastic application for doing atomic orbital based DFT and other ab initio electronic structure
rjohns03/benchmarks
HPC Benchmarks for most popular applications in Chemistry, Physics, Biology, and some other related subjects
rjohns03/blastdbget
Download Blast databases from ftp.ncbi.nlm.nih.gov/blast/db, validate, and extract.
rjohns03/CharlesScripts
My awesome scripts for Arch Linux or Ubuntu Gnome latest LTS or MacBook.
rjohns03/Command-line-text-processing
From finding text to search and replace, from sorting to beautifying text and more
rjohns03/DFTworkshop
rjohns03/dotfiles
:wrench: .files, including ~/.macos — sensible hacker defaults for macOS
rjohns03/dotfiles-1
~rtomayko
rjohns03/fonts
Patched fonts for Powerline users.
rjohns03/galaxy
Data intensive biology for everyone.
rjohns03/gizak.github.io
My Personal Website
rjohns03/hpctoolkit
HPCToolkit performance tools: measurement and analysis components
rjohns03/iTerm2-Color-Schemes
Over 150 terminal color schemes/themes for iTerm/iTerm2 (with ports to Terminal, Konsole, PuTTY, Xresources, XRDB, and Terminator)
rjohns03/laptop
A shell script to set up a macOS laptop for web and mobile development.
rjohns03/linuxgems
A succinct cheat sheet for newbie linux coders and system administrators, documenting some of the more obscure and useful gems of linux lore. Intended to be viewed in emacs org-mode, or VimOrganizer, though any text editor will suffice.
rjohns03/ncbi-blast-dbs
Fast download BLAST databases from NCBI.
rjohns03/pandoc-starter
Template *.md and Makefiles for getting started with pandoc
rjohns03/psi4education
Psi4Education Labs Public Repository. If you are submitting a new lab, please submit it to the psi4education-instructor repo.
rjohns03/psi4numpy
Combining Psi4 and Numpy for education and development.
rjohns03/rjohns03.github.com
rjohns03/sarviewer
Generate graphs with gnuplot or matplotlib (Python) from sar data
rjohns03/Saved-Code
Useful Code for Future Reference
rjohns03/ScriptsForVASP
Making life easier using scripting languages (Bash and Python) to facilitate multiple VASP simulation jobs preparation, submission and analysis.
rjohns03/spark-on-wheeler
Example Spark (Hadoop without hdfs) job that runs within Torque (PBS) on the wheeler machine at CARC
rjohns03/tiddlylisp
A toy Lisp interpreter and simple eval function
rjohns03/vimrc
The ultimate Vim configuration: vimrc