rjsicko/NBS_NGS

Issues

• SampleSheet.corrected.csv

  #18 opened 3 years ago by rjsicko
  0

• log file

  #17 opened 3 years ago by rjsicko
  0

• polyTG enhancements

  #10 opened 5 years ago by rjsicko
  3

• 3rd tier detail report

  #16 opened 3 years ago by rjsicko
  0

• archer_process_miseq_run.sh - error check samplesheet.csv

  #15 opened 3 years ago by rjsicko
  0

• see if we can make homozygous variants count as 2 on the 'variant count' column.

  #14 opened 3 years ago by rjsicko
  1

• Variant report enhancements

  #5 opened 3 years ago by rjsicko
  2

• all reports - sample ID

  #2 opened 3 years ago by rjsicko
  1

• QC report enhancements

  #1 opened 3 years ago by rjsicko
  3

• 3rd tier work list

  #4 opened 3 years ago by rjsicko
  0

• NYS_CF_2ND_TIER_VARIANT_REPORT_v1.0.0-rc.1

  #3 opened 3 years ago by rjsicko
  0

• print pdfs

  #6 opened 3 years ago by rjsicko
  1

• ? for variant reports

  #7 opened 3 years ago by rjsicko
  1

• reports as job hooks

  #8 opened 3 years ago by rjsicko
  0

• all reports

  #11 opened 5 years ago by rjsicko
  1

• Automated Run QC and Processing

  #13 opened 3 years ago by rjsicko
  2

• check AF table filter is set to 0.20

  #12 opened 5 years ago by rjsicko
  0

• job hooks to queue 3rd tier

  #9 opened 5 years ago by rjsicko
  0