eARDS Model Code Base
Run model.py file to test the eARDS model performance.
python model.py
This script takes following input file paths:
| File | Type |
|---|---|
| Data | CSV |
| Demographics | CSV |
| Age | CSV |
| Comorbidites | CSV |
The Data file contains following variables with the name mentioned in the table below:
| Patient Info/Vital/Labs | Variable | Variable Type | Unit |
|---|---|---|---|
| Patient ID | patient_id | Unique Number | None |
| Time | time | Time stamp | datatime |
| Albumin | albumin | Continous | |
| Bicarbonate | bicarbonate | Continous | |
| Bilirubin | bilirubin | Continous | |
| Creatinine | creatinine | Continous | |
| Glucose | glucose | Continous | |
| Hematocrit | hematocrit | Continous | |
| PEEP | peep | Continous | |
| Sodium | sodium | Continous | |
| WBC | wbc | Continous | |
| Heart Rate | heart_rate | Continous | |
| Mean Arterial Pressure | map | Continous | |
| PaCo2 | pco2 | Continous | |
| PaO2 | pao2 | Continous | |
| FiO2 | fio2 | Continous | |
| Plateau Pressure | pp | Continous | |
| Platalet Count | plat_cnt | Continous | |
| Systolic Blood Pressure | sbp | Continous | |
| Temperature | temperature | Continous | |
| Tidal Volume | tidal_v | Continous | |
| O2 Flow | o2_flow | Continous | |
| Chloride | chloride | Continous | |
| Lactate | lactate | Continous | |
| Calcium | calcium | Continous | |
| Respiratory Rate | respiratory_rate | Continous | |
| Pattasium | potassium | Continous | |
| Anion Gap | anion_gap | Continous | |
| SpO2 | spo2 | Continous | |
| Oxgen Therapy | oxygen_therapy | Binary Indicator | None |
| Mechanical Ventilation | mech_ventilation | Binary Indicator | None |
| Vasopressor | vasopresso | Binary Indicator | None |
| Vasocount | vasocount | Binary Indicator | None |
| Ionotrope | ionotrope | Binary Indicator | None |
| Ionocount | ionocount | Binary Indicator | None |
The Demographics file contains following variables with the name mentioned in the table below:
| Demographic | Variable |
|---|---|
| Person ID | personid |
| Gender | gender |
The Age file contains following variables with the name mentioned in the table below:
| Age | Variable |
|---|---|
| Person ID | personid |
| Age | age |
The Comorbidity file contains following variables with the name mentioned in the table below:
| Comorbidity | Variable | Variable Type |
|---|---|---|
| Person ID | personid | Unique Number |
| Congestive Heart Failure | congestive_heart_failure | Binary Indicator |
| Cardiac Arrhythmias | cardiac_arrhythmias | Binary Indicator |
| Valvular Disease | valvular_disease | Binary Indicator |
| Hypertension | hypertension | Binary Indicator |
| Chronic Pulmonary | chronic_pulmonary | Binary Indicator |
| Diabetes Uncomplicated | diabetes_uncomplicated | Binary Indicator |
| Diabetes Complicated | diabetes_complicated | Binary Indicator |
| Renal Failure | renal_failure | Binary Indicator |
| Liver Disease | liver_disease | Binary Indicator |
| Metastatic Cancer | metastatic_cancer | Binary Indicator |
| Rheumatoid Arthritis | rheumatoid_arthritis | Binary Indicator |
| Obesity | obesity | Binary Indicator |