Repository for Q&D lab scripting projects; primarily a repository of scripts not history
cysteine-cis-cysteine checking scripts
script to automate Liz's HACO pipeline (carbon-hydrogen hbonds, usually in beta sheet)
usage = '''process_t8000.py $listfile Will go look for PDBS from that listfile at (for 1UBQ) /home/smlewis/whole_PDB_as_PDB/ub/pdb1ubq.ent.gz, and grep out the chain listed into a new file'''
Various lab related quaries to the MongoDB. This is where the update scripts for the PDBe-collections are.
#rsync_pdb This does not actually contain a script, but rather instructions on rsyncing the PDB
#nonbonded_sym_contacts This script returns a list of nonbonded inter-asymmetric-unit interactions.