Pinned Repositories
atacseq-heatmaps
Tutorial Code on creating sample comparison heatmaps from ATAC-Seq data
bedtools-tutorial
A basic tutorial on using bedtools with practice problems
biobank_trait_report
Generate pdf reports of traits to identify data sources or classifications to be used in cleaning and data harmonization
bioe131
bioengineering 131 stuff
bmi206
Code for bmi206 - 2019
chen-scrnaseq-reanalysis
ezUCSC
A series of different scripts to speed up the process of downloading data from the UCSC genome browser
genotyping-qc-pipeline
Scripts and General Pipeline for QC-ing genotyping data
gffToChrs
rna-seq-tutorial
Practice RNA-seq problems
rmandla's Repositories
rmandla/genotyping-qc-pipeline
Scripts and General Pipeline for QC-ing genotyping data
rmandla/rna-seq-tutorial
Practice RNA-seq problems
rmandla/atacseq-heatmaps
Tutorial Code on creating sample comparison heatmaps from ATAC-Seq data
rmandla/bedtools-tutorial
A basic tutorial on using bedtools with practice problems
rmandla/biobank_trait_report
Generate pdf reports of traits to identify data sources or classifications to be used in cleaning and data harmonization
rmandla/bioe131
bioengineering 131 stuff
rmandla/bmi206
Code for bmi206 - 2019
rmandla/chen-scrnaseq-reanalysis
rmandla/ezUCSC
A series of different scripts to speed up the process of downloading data from the UCSC genome browser
rmandla/gffToChrs
rmandla/Harmony
Harmony framework for connecting scRNA-seq data from discrete time points
rmandla/HIV-Classifier
Classifying HIV into subtypes based on their genomic data
rmandla/MISO
MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation
rmandla/MultiSeq-Primer-Design
Easily design primers for many sequences
rmandla/phast-examples
Example use cases of the phast package
rmandla/quantized-redness
Write-up of my work quantizing redness in butterfly hind wings
rmandla/rmandla.github.io
Website for the Vedantham Lab
rmandla/travis-broken-example
An example that will cause a build failure
rmandla/ucla-201-apicard
rmandla/w32-rps-Fall2023