rmzelle
Sr. Research Scientist in microbial bioinformatics at Mascoma LLC (Lallemand). Retired open source maintainer/developer of the Citation Style Language
Vermont, USA
Pinned Repositories
csl-validator
Validator for CSL styles and locales
documentation
Citation Style Language documentation
locales
Official repository for Citation Style Language (CSL) locale files.
schema
Citation Style Language schema
styles
Official repository for Citation Style Language (CSL) citation styles.
documentation
CSL Documentation
ref-extractor
Reference Extractor - Extract Zotero/Mendeley references from Microsoft Word files
rmzelle's Repositories
rmzelle/ref-extractor
Reference Extractor - Extract Zotero/Mendeley references from Microsoft Word files
rmzelle/dna-flip
Reverse, complement, and reverse complement conversions of DNA or RNA sequences
rmzelle/2020-workflows-paper
Strategies for leveraging workflow systems to streamline large-scale biological analyses
rmzelle/bedtools2
A powerful toolset for genome arithmetic.
rmzelle/bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
rmzelle/citation.js
Citation.js converts formats like BibTeX, Wikidata JSON and ContentMine JSON to CSL-JSON to convert to other formats like APA, Vancouver and back to BibTeX.
rmzelle/community-starter-kit
Community Starter Kit
rmzelle/distribution-updater
A WSGI app to update the CSL styles distribution repo based on a Travis CI webhook
rmzelle/doc
OmniDB documentation
rmzelle/docs
User and developer documentation for Vanilla Forums.
rmzelle/docs-travis-ci-com
The Travis CI Documentation
rmzelle/explore
Community-curated topic pages on GitHub
rmzelle/Flye
De novo assembler for single molecule sequencing reads using repeat graphs
rmzelle/github-canned-responses
:zzz: (inactive) Because copy pasting isn't that great.
rmzelle/gitignore
A collection of useful .gitignore templates
rmzelle/js-datatable
JQuery plugin to generate dynamic HTML tables with data visualization https://toni-heittola.github.io/js-datatable/
rmzelle/just-the-docs
A modern, high customizable, responsive Jekyll theme for documention with built-in search.
rmzelle/manubot.org
Source code for https://manubot.org
rmzelle/markdown-guide
The comprehensive Markdown reference guide.
rmzelle/mime-db
Media Type Database
rmzelle/p3_docs
This repository is for manage PATRIC static contents such as Website Tutorial, CLI Tutorial, User Guides, and PATRIC eNews.
rmzelle/paper
rmzelle/porecamp.github.io
PoreCamp - a training bootcamp based on the Oxford Nanopore MinION
rmzelle/qdacco
qdacco (interface to use Dacco XML files, http://www.catalandictionary.org). Packaged in Debian and Ubuntu
rmzelle/rgi
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
rmzelle/rmarkdown-cookbook
[WIP] R Markdown Cookbook. A range of tips and tricks to make better use of R Markdown.
rmzelle/rmzelle.github.io
rmzelle/training-kit
Open source on demand courses and cheat sheets for Git and GitHub
rmzelle/travis-buddy
:rocket: TravisBuddy is an awesome bot that will make life much easier for your contributors
rmzelle/unpaywall-data-website
Website for Unpaywall Data