Pinned Repositories
ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
CNOGpro
:exclamation: This is a read-only mirror of the CRAN R package repository. CNOGpro — Copy Numbers of Genes in prokaryotes
CNproScan
CNV detection for prokaryote genomes using NGS sequencing data
CNproScanMatlab
CNproScan - Matlab version
Cross-correlation-based-detection-of-contigs-overlaps
Scripts for IEEE MIPRO 2018 Conference paper
exomeCNVpipeline
exomeCNVpipeline
GC_Assembly
MAGeCKFlute
Integrative analysis pipeline for pooled CRISPR functional genetic screens
Overlap-detection-for-a-genome-assembly-based-on-genomic-signal-processing
Script for IEEE CBMS paper 2017
ProcaryaSV
An ensemble structural variant calling pipeline driven by snakemake using multiple SV and CNV callers.
robinjugas's Repositories
robinjugas/CNproScan
CNV detection for prokaryote genomes using NGS sequencing data
robinjugas/ProcaryaSV
An ensemble structural variant calling pipeline driven by snakemake using multiple SV and CNV callers.
robinjugas/ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
robinjugas/CNOGpro
:exclamation: This is a read-only mirror of the CRAN R package repository. CNOGpro — Copy Numbers of Genes in prokaryotes
robinjugas/CNproScanMatlab
CNproScan - Matlab version
robinjugas/Cross-correlation-based-detection-of-contigs-overlaps
Scripts for IEEE MIPRO 2018 Conference paper
robinjugas/exomeCNVpipeline
exomeCNVpipeline
robinjugas/GC_Assembly
robinjugas/MAGeCKFlute
Integrative analysis pipeline for pooled CRISPR functional genetic screens
robinjugas/Overlap-detection-for-a-genome-assembly-based-on-genomic-signal-processing
Script for IEEE CBMS paper 2017
robinjugas/OverlapDetectionByGSP
Overlap detection for genome assembly based on genomic signal processing
robinjugas/WSHPackage
R package for the calculation of the following Within-Sample Heterogeneity Scores in Bisulfite Sequencing Data: FDRP, qFDRP, PDR, Epipolymorphism, Methylation Entropy and MHL
robinjugas/PipelineForEpigeneticProfiling
Dataset of Epigenetic profiles of pediatric oncology tumors