Pinned Repositories
ceres
Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens
ceres-manuscript
Analysis code for CERES manuscript (Meyers, Bryan, et al. Nature Genetics. 2017)
4CPipeline
atac-encode-snakemake
Snakemake pipeline to automate running multiple samples through the ENCODE ATAC-seq workflow
motifBreakR
A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
niboR
niboR | Robin convenient R functions for analysis
pan-meyers-et-al
Code to reproduce analyses and figures from Pan, Meyers, et al.
transloc_pipeline
Translocation Sequencing Pipeline (Alt Lab)
robinmeyers's Repositories
robinmeyers/pan-meyers-et-al
Code to reproduce analyses and figures from Pan, Meyers, et al.
robinmeyers/transloc_pipeline
Translocation Sequencing Pipeline (Alt Lab)
robinmeyers/atac-encode-snakemake
Snakemake pipeline to automate running multiple samples through the ENCODE ATAC-seq workflow
robinmeyers/motifBreakR
A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
robinmeyers/niboR
niboR | Robin convenient R functions for analysis
robinmeyers/4CPipeline
robinmeyers/chrombpnet
Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
robinmeyers/chrombpnet-lite-snakemake
robinmeyers/cutnrun-snakemake
robinmeyers/genetics-l2g-scoring
Locus-to-gene scoring pipeline
robinmeyers/genetics-v2g-data
Workflows to generate cis-regulatory datasets used for variant-to-gene (V2G) assignment in Open Targets Genetics
robinmeyers/GROseqPipeline
robinmeyers/IR_Black-OSX
A black OS X Terminal theme that is actually readable (by Todd Werth) (Files for Mac OS 10.7+)
robinmeyers/mpra-gwas-builder
robinmeyers/MPRAnalyze
Analyse enhancer strength based on MPRA experiments.
robinmeyers/ngs-test-data
A workflow for creating small NGS test data sets, useful for continuous integration.
robinmeyers/rbpnet
robinmeyers/rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
robinmeyers/sample_app
robinmeyers/SHMPipeline
robinmeyers/SHMSanger
robinmeyers/TranslocApp
robinmeyers/TranslocWebInterface
robinmeyers/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
robinmeyers/xgboost
Large-scale and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, on single node, hadoop yarn and more.