rodriados/museqa

Issues

• Improve FASTA parser robustness

  #34 opened 9 months ago by rodriados
  0

• Introduce middlewares on pipeline modules

  #29 opened 4 years ago by rodriados
  0

• Improve installation process

  #26 opened 4 years ago by rodriados
  0

• Implement subprograms and routines

  #27 opened 4 years ago by rodriados
  0

• Adjust guide-tree rerooting when using phylogeny's njoining algorithm

  #28 opened 4 years ago by rodriados
  0

• Install Docker and CI integrations

  #25 opened 4 years ago by rodriados
  1

• Implement unit tests for the phylogeny module

  #24 opened 4 years ago by rodriados
  0

• Sequential neighbor-joining algorithm crashes when running in parallel

  #20 opened 4 years ago by rodriados
  0

• Allow multiple alignments per GPU block in hybrid-needleman algorithm

  #19 opened 4 years ago by rodriados
  0

• Improvements to the pair generation algorithm

  #18 opened 4 years ago by rodriados
  0

• Avoid creation of zombie processes

  #1 opened 6 years ago by rodriados
  1

• Avoid GPU memory allocation by master node in pairwise module

  #16 opened 5 years ago by rodriados
  0

• Implement gap extension penalties in pairwise module

  #15 opened 5 years ago by rodriados
  0

• Hybrid pairwise using shared-memory Scoring Table

  #11 opened 5 years ago by rodriados
  0

• Add new input sequence parsers

  #13 opened 5 years ago by rodriados
  0

• Improve const-qualifier consistency and enforcement

  #8 opened 5 years ago by rodriados
  1

• Introduce assert guards

  #9 opened 5 years ago by rodriados
  1

• Standardization of Reflection using Loophole and Reflector

  #7 opened 6 years ago by rodriados
  2

• Improve time measurements

  #6 opened 6 years ago by rodriados
  0

• Hybrid needleman wrong results

  #5 opened 6 years ago by rodriados
  1

• msarun should take care of error handling

  #4 opened 6 years ago by rodriados
  0

• Compress FastaSequence outside Pairwise module

  #3 opened 6 years ago by rodriados
  0