Pinned Repositories
16S-rDNA-V3-V4
16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
adanet
Fast and flexible AutoML with learning guarantees.
alphafold
Open source code for AlphaFold.
autogen
Enable Next-Gen Large Language Model Applications. Join our Discord: https://discord.gg/pAbnFJrkgZ
chatgpt-on-wechat
基于大模型搭建的聊天机器人，同时支持 微信公众号、企业微信应用、飞书、钉钉 等接入，可选择GPT3.5/GPT-4o/GPT-o1/ Claude/文心一言/讯飞星火/通义千问/ Gemini/GLM-4/Claude/Kimi/LinkAI，能处理文本、语音和图片，访问操作系统和互联网，支持基于自有知识库进行定制企业智能客服。
CLIP
CLIP (Contrastive Language-Image Pretraining), Predict the most relevant text snippet given an image
crc_meta
Code and analysis results for the CRC shotgun meta-analysis
Getting-Things-Done-with-Pytorch
Jupyter Notebook tutorials on solving real-world problems with Machine Learning & Deep Learning using PyTorch. Topics: Face detection with Detectron 2, Time Series anomaly detection with LSTM Autoencoders, Object Detection with YOLO v5, Build your first Neural Network, Time Series forecasting for Coronavirus daily cases, Sentiment Analysis with BERT.
hap.py
Haplotype VCF comparison tools
rogerzhanglijie's Repositories
rogerzhanglijie/16S-rDNA-V3-V4
16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Demo: https://ycl6.github.io/16S-Demo/
rogerzhanglijie/adanet
Fast and flexible AutoML with learning guarantees.
rogerzhanglijie/alphafold
Open source code for AlphaFold.
rogerzhanglijie/autogen
Enable Next-Gen Large Language Model Applications. Join our Discord: https://discord.gg/pAbnFJrkgZ
rogerzhanglijie/CLIP
CLIP (Contrastive Language-Image Pretraining), Predict the most relevant text snippet given an image
rogerzhanglijie/crc_meta
Code and analysis results for the CRC shotgun meta-analysis
rogerzhanglijie/Getting-Things-Done-with-Pytorch
Jupyter Notebook tutorials on solving real-world problems with Machine Learning & Deep Learning using PyTorch. Topics: Face detection with Detectron 2, Time Series anomaly detection with LSTM Autoencoders, Object Detection with YOLO v5, Build your first Neural Network, Time Series forecasting for Coronavirus daily cases, Sentiment Analysis with BERT.
rogerzhanglijie/hap.py
Haplotype VCF comparison tools
rogerzhanglijie/hrdetect-pipeline
rogerzhanglijie/ilus
A handy pipeline generator for whole genome re-sequencing (WGS) and whole exom sequencing data (WES) analysis.
rogerzhanglijie/Machine-Learning-from-Scratch
Succinct Machine Learning algorithm implementations from scratch in Python, solving real-world problems (Notebooks and Book). Examples of Logistic Regression, Linear Regression, Decision Trees, K-means clustering, Sentiment Analysis, Recommender Systems, Neural Networks and Reinforcement Learning.
rogerzhanglijie/metabolic_analysis
rogerzhanglijie/MONOD2
MONOD2 is a toolkit for methylation haplotype analysis of bisulfite sequencing data
rogerzhanglijie/Python-100-Days
Python - 100天从新手到大师
rogerzhanglijie/rnaseq-nf
A proof of concept of RNAseq pipeline
rogerzhanglijie/shallowHRD
This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination Deficiency of a tumor based on the number of Large-scale Genomic Alterations (LGAs).
rogerzhanglijie/Solubility-Prediction-with-Graph-Neural-Networks
GNN, GCN, Molecular Solubility, RDKit, Cheminformatics
rogerzhanglijie/VAE_animeface
Variational autoencoder for anime face reconstruction
rogerzhanglijie/vcfstats
Powerful statistics for VCF files
rogerzhanglijie/wesReport