/CONCORD-VCF

Tool compare VCF in vcf format or in an excel file

Primary LanguagePythonMIT LicenseMIT

CONCORD-VCF

VCF CONCORDANCE TOOL TO CHECK THE CONCORDANCE BETWEEN ANY TWO VCF FILES

Tool can support .vcf file input and workbench excel format

THINGS TOOL CAN DO:

  1. Checks the correltion of varaiants between two files
  2. Checks the total number of SNP's
  3. Checks The total number of INDEL's
  4. Checks the correlation of variant frequency with total number
  5. checks the correlation of variant frequency with Total depth