rohanmaddamsetti

Pinned Repositories

18S191
Course 18.S191 at MIT, fall 2020 - Introduction to computational thinking with Julia:
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adjustText
A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.
Language:Jupyter Notebook0 1 00
angst
Analyzer of Gene and Species Trees
Language:Python0 2 00
AR-gene-plasmid-analysis
Language:Julia0 2 00
Ara-1_Frequency_Dependence
Language:R0 2 00
Ara-1_Genotyping
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DDOL-plasmid-bioinformatics
Language:Python1 1 00
PCN-db-pipeline
Language:Python1 0 00
STLE-analysis
Language:Python1 2 00

rohanmaddamsetti's Repositories

rohanmaddamsetti/DDOL-plasmid-bioinformatics
Language:Python1 1 00
rohanmaddamsetti/PCN-db-pipeline
Language:Python1 0 00
rohanmaddamsetti/18S191
Course 18.S191 at MIT, fall 2020 - Introduction to computational thinking with Julia:
Language:HTML00
rohanmaddamsetti/AR-gene-plasmid-analysis
Language:Julia0 2 00
rohanmaddamsetti/BacterialSlimulations
Simulate Bacterial population with SLiM
Language:Python0 1 00
rohanmaddamsetti/barcoding-for-Yi
Language:Julia
rohanmaddamsetti/cpsG-evolution
Language:R2 0
rohanmaddamsetti/darwinian-circuit
Language:Jupyter Notebook
rohanmaddamsetti/DCell
DCell browser and gene deletion simulator
rohanmaddamsetti/DM0-evolution
Language:Jupyter Notebook2 02
rohanmaddamsetti/Duke-ESBL-seq-annotation
Language:Python
rohanmaddamsetti/entropy
An explainer on entropy
Language:JavaScript1 0
rohanmaddamsetti/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
rohanmaddamsetti/formal-systems-in-biology
Application of formal systems to model biological systems
1 0
rohanmaddamsetti/influential-cs-books
Most influential books on Computer Science/programming
rohanmaddamsetti/LTEE-anaerobic
genomics for Nkrumah Grant's LTEE anaerobic fitness project
Language:Python
rohanmaddamsetti/LTEE-network-analysis
Language:Jupyter Notebook
rohanmaddamsetti/LTEE-purifying-selection
Language:R2 31
rohanmaddamsetti/obelisk-SK36
Language:Julia
rohanmaddamsetti/PlasFlow
Software for prediction of plasmid sequences in metagenomic assemblies
rohanmaddamsetti/plasmid-scaling-laws
Language:Python
rohanmaddamsetti/precise-db
A high-fidelity E. coli RNA-seq compendium
rohanmaddamsetti/SKA
Split Kmer Analysis
Language:C++0 0
rohanmaddamsetti/SodaPop
A tool for multiscale forward-time simulation of protein evolution.
Language:C++1 0
rohanmaddamsetti/STIMS
Language:Julia1 0
rohanmaddamsetti/tetA-fitness-landscape
Language:Jupyter Notebook
rohanmaddamsetti/transposon-plasmid-evolution
Language:R
rohanmaddamsetti/WholeCellEcoliRelease
Release of the whole cell E. coli model.
Language:Python1 0
rohanmaddamsetti/yeast-biofilm-RNAseq
Language:R
rohanmaddamsetti/youlab-ARG-duplications
Language:Julia1 0